Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32176 | Soybean | nucleus | 44.5 | 53.76 |
| KRH31709 | Soybean | nucleus | 41.15 | 51.5 |
| KRG97053 | Soybean | nucleus | 46.41 | 49.24 |
| KRH19551 | Soybean | nucleus | 41.63 | 48.88 |
| Solyc11g011750.1.1 | Tomato | nucleus | 37.32 | 46.99 |
| KRH19548 | Soybean | nucleus | 47.37 | 46.48 |
| KRH19550 | Soybean | nucleus | 44.5 | 46.27 |
| KRG92311 | Soybean | nucleus | 47.37 | 46.26 |
| PGSC0003DMT400034489 | Potato | nucleus | 37.32 | 45.88 |
| KRH69130 | Soybean | nucleus | 44.5 | 45.81 |
| PGSC0003DMT400034490 | Potato | nucleus | 36.84 | 45.56 |
| KRH19549 | Soybean | nucleus | 47.85 | 45.45 |
| KRH34483 | Soybean | nucleus | 46.89 | 44.75 |
| PGSC0003DMT400034487 | Potato | nucleus | 37.8 | 44.38 |
| PGSC0003DMT400037877 | Potato | nucleus | 33.49 | 44.03 |
| Solyc11g011740.1.1 | Tomato | nucleus | 36.84 | 43.75 |
| PGSC0003DMT400092292 | Potato | nucleus | 41.15 | 42.79 |
| Solyc05g051200.1.1 | Tomato | nucleus | 41.63 | 38.84 |
| PGSC0003DMT400037826 | Potato | nucleus | 41.15 | 38.22 |
| Solyc05g051180.1.1 | Tomato | nucleus | 36.84 | 36.67 |
| KRH67371 | Soybean | nucleus | 41.15 | 35.54 |
| KRG95657 | Soybean | nucleus | 42.11 | 34.78 |
| Solyc04g014530.1.1 | Tomato | nucleus | 38.76 | 34.76 |
| KRH67369 | Soybean | nucleus | 37.8 | 34.2 |
| KRH19553 | Soybean | nucleus | 42.11 | 33.98 |
| KRG95654 | Soybean | nucleus | 30.62 | 33.86 |
| KRH32180 | Soybean | nucleus | 42.11 | 32.59 |
| PGSC0003DMT400060732 | Potato | nucleus | 38.76 | 29.03 |
| KRH21337 | Soybean | nucleus | 33.97 | 26.79 |
| KRH10963 | Soybean | nucleus | 33.49 | 26.32 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | UniProt:A0A0R0EXG8 | EMBL:ACUP02012125 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_19G163900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRG95655 | ProteinID:KRG95655 | ProteinID:KRG95655.1 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF35 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0006EDBE7D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:42462973..42464952
Molecular Weight (calculated)
23668.8 Da
IEP (calculated)
7.131
GRAVY (calculated)
-0.672
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPFFQHAD WGMLKEPNSD ILFESFSSKG VDHDPFHDCL SFDMIDNSRD PQEESHHQVI EEAMKTKKKS YIGVRRRPWG RFAAEIRDTT RKGIRVWLGT
101: FDSAEEAALA YDQAAFSMRG SSAVLNFPVK RVKESLQEMN YSGCSRGCSP ALELKERHNI RRKLSSSSKA KTSKRKQDLE ESSVVVLEDL GADYLEALLS
201: TSADQISPR
101: FDSAEEAALA YDQAAFSMRG SSAVLNFPVK RVKESLQEMN YSGCSRGCSP ALELKERHNI RRKLSSSSKA KTSKRKQDLE ESSVVVLEDL GADYLEALLS
201: TSADQISPR
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.