Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19551 | Soybean | nucleus | 84.39 | 82.02 |
| KRH19550 | Soybean | nucleus | 84.39 | 72.64 |
| KRH19549 | Soybean | nucleus | 84.39 | 66.36 |
| KRH19548 | Soybean | nucleus | 78.03 | 63.38 |
| KRH31709 | Soybean | nucleus | 47.4 | 49.1 |
| Solyc11g011740.1.1 | Tomato | nucleus | 47.4 | 46.59 |
| Solyc11g011750.1.1 | Tomato | nucleus | 44.51 | 46.39 |
| PGSC0003DMT400034490 | Potato | nucleus | 45.09 | 46.15 |
| PGSC0003DMT400034487 | Potato | nucleus | 47.4 | 46.07 |
| PGSC0003DMT400034489 | Potato | nucleus | 45.09 | 45.88 |
| KRG95655 | Soybean | nucleus | 53.76 | 44.5 |
| KRH69130 | Soybean | nucleus | 51.45 | 43.84 |
| PGSC0003DMT400037877 | Potato | nucleus | 39.88 | 43.4 |
| KRG97053 | Soybean | nucleus | 47.4 | 41.62 |
| KRG92311 | Soybean | nucleus | 50.87 | 41.12 |
| KRH34483 | Soybean | nucleus | 49.13 | 38.81 |
| PGSC0003DMT400092292 | Potato | nucleus | 44.51 | 38.31 |
| PGSC0003DMT400037826 | Potato | nucleus | 48.55 | 37.33 |
| Solyc05g051200.1.1 | Tomato | nucleus | 47.4 | 36.61 |
| KRH67371 | Soybean | nucleus | 50.29 | 35.95 |
| Solyc05g051180.1.1 | Tomato | nucleus | 42.77 | 35.24 |
| KRG95657 | Soybean | nucleus | 50.87 | 34.78 |
| KRH19553 | Soybean | nucleus | 51.45 | 34.36 |
| KRG95654 | Soybean | nucleus | 36.99 | 33.86 |
| Solyc04g014530.1.1 | Tomato | nucleus | 43.93 | 32.62 |
| KRH32180 | Soybean | nucleus | 50.87 | 32.59 |
| KRH67369 | Soybean | nucleus | 42.77 | 32.03 |
| PGSC0003DMT400060732 | Potato | nucleus | 42.2 | 26.16 |
| KRH21337 | Soybean | nucleus | 35.84 | 23.4 |
| KRH10963 | Soybean | nucleus | 35.84 | 23.31 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:ACUP02006099 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_10G036300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:K7LH99 | EnsemblPlants:KRH32176 | ProteinID:KRH32176 | ProteinID:KRH32176.1 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF35 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000296B799 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:3167324..3167845
Molecular Weight (calculated)
19328.7 Da
IEP (calculated)
8.791
GRAVY (calculated)
-0.590
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDFSTAPTT EGNHNDEAKQ LVVKSEGQNK QRSYIGVRKR PWGKFAAEIR DTTRNGTRVW LGTFDTAEAA ALAYDQAAFS MRGQSAVLNF PVKRVKESLQ
101: EIQYSCFFNG SSSPALALKE RHCIQRKLSS KGKKCKGKET SESVVVLEDL GVDYLEQLLS LSDQSESPSY FNY
101: EIQYSCFFNG SSSPALALKE RHCIQRKLSS KGKKCKGKET SESVVVLEDL GVDYLEQLLS LSDQSESPSY FNY
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.