Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400044379 | Potato | nucleus | 94.17 | 93.78 |
| KRH31709 | Soybean | nucleus | 44.58 | 64.07 |
| Solyc03g005520.1.1 | Tomato | nucleus | 56.25 | 63.98 |
| Solyc09g066360.1.1 | Tomato | nucleus | 48.75 | 60.62 |
| KRG92311 | Soybean | nucleus | 52.92 | 59.35 |
| KRH69130 | Soybean | nucleus | 49.58 | 58.62 |
| KRH34483 | Soybean | nucleus | 52.92 | 57.99 |
| Solyc11g006050.1.1 | Tomato | nucleus | 44.17 | 53.27 |
| Solyc11g011750.1.1 | Tomato | nucleus | 32.92 | 47.59 |
| Solyc11g011740.1.1 | Tomato | nucleus | 34.17 | 46.59 |
| Solyc04g014530.1.1 | Tomato | nucleus | 40.0 | 41.2 |
| Solyc05g051200.1.1 | Tomato | nucleus | 35.83 | 38.39 |
| Solyc05g051180.1.1 | Tomato | nucleus | 31.67 | 36.19 |
| Solyc02g077360.1.1 | Tomato | nucleus | 29.58 | 27.52 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EMBL:AF494201 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF67 | UniProt:Q8H6S9 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:Solyc09g089930.1 | EnsemblPlants:Solyc09g089930.1.1 | UniParc:UPI00000AD3FB | SEG:seg |
Description
Transcription factor TSRF1 [Source:UniProtKB/TrEMBL;Acc:Q8H6S9]
Coordinates
chr9:+:69543443..69544165
Molecular Weight (calculated)
27032.1 Da
IEP (calculated)
4.729
GRAVY (calculated)
-0.592
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSSSSSQF FYSMNSDLNS SDSSYEWSNF NTQSYLPFNV NDSEEMLLFG VLNAAHEETT SETVTSHRVK EEEVTSESEV IEAIPAKEKS YRGVRRRPWG
101: KFAAEIRDST RNGVRVWLGT FDSAEDAALA YDQAAFSMRG NSAILNFPVE TVRDSLRDMK CHVDDDCSPV VALKKRHSMR KRSTNSKKVN SISKVVREVK
201: MENVNNVVVF EDLGADYLEQ LLSSSSSDQS SCDATYFSPW
101: KFAAEIRDST RNGVRVWLGT FDSAEDAALA YDQAAFSMRG NSAILNFPVE TVRDSLRDMK CHVDDDCSPV VALKKRHSMR KRSTNSKKVN SISKVVREVK
201: MENVNNVVVF EDLGADYLEQ LLSSSSSDQS SCDATYFSPW
001: MDPFLIQSPF SGFSPEYSIG SSPDSFSSSS SNNYSLPFNE NDSEEMFLYG LIEQSTQQTY IDSDSQDLPI KSVSSRKSEK SYRGVRRRPW GKFAAEIRDS
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
101: TRNGIRVWLG TFESAEEAAL AYDQAAFSMR GSSAILNFSA ERVQESLSEI KYTYEDGCSP VVALKRKHSM RRRMTNKKTK DSDFDHRSVK LDNVVVFEDL
201: GEQYLEELLG SSENSGTW
Arabidopsis Description
ERF1BEthylene-responsive transcription factor 1B [Source:UniProtKB/Swiss-Prot;Acc:Q8LDC8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.