Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22538 Sorghum nucleus 59.87 32.87
Zm00001d039019_P001 Maize nucleus 60.51 32.76
TraesCS1B01G427600.1 Wheat nucleus 54.14 29.31
TraesCS1A01G399500.1 Wheat nucleus 53.5 28.97
TraesCS1D01G407000.1 Wheat nucleus 50.32 28.32
TraesCS1D01G407100.1 Wheat nucleus 52.23 28.28
Zm00001d009573_P001 Maize nucleus 49.04 28.0
TraesCS1B01G427500.1 Wheat nucleus 48.41 26.95
KRH21337 Soybean nucleus 29.94 17.74
KRH10963 Soybean nucleus 28.03 16.54
VIT_10s0003g00590.t01 Wine grape nucleus 28.66 16.25
Solyc02g077360.1.1 Tomato nucleus 22.29 13.57
PGSC0003DMT400027839 Potato nucleus 21.66 13.03
CDX78856 Canola nucleus 14.01 8.49
Bra013310.1-P Field mustard nucleus 14.65 7.57
AT4G18450.1 Thale cress nucleus 12.74 6.6
Os07t0410700-01 Rice nucleus 9.55 6.28
Os05t0448675-00 Rice nucleus 7.64 5.5
Os09t0572000-01 Rice nucleus 8.28 5.46
Os01t0752500-01 Rice nucleus 5.73 4.25
Os03t0860100-01 Rice nucleus 5.1 3.56
Protein Annotations
MapMan:35.2UniProt:A0A0P0WR52ProteinID:BAS95359.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:Os05g0564700EnsemblPlants:Os05t0564700-00PANTHER:PTHR31677PANTHER:PTHR31677:SF16UniParc:UPI000393AD57
SEG:seg:::::
Description
ETHYLENE RESPONSE FACTOR 84Conserved hypothetical protein. (Os05t0564700-00)
Coordinates
chr5:-:28109440..28110288
Molecular Weight (calculated)
16475.0 Da
IEP (calculated)
3.795
GRAVY (calculated)
0.029
Length
157 amino acids
Sequence
(BLAST)
001: MAIGAAPASN QPHDTSNILE NVWASIMTSS SSPAVSSSVA VSSSAVTGQE ENSAILQRLP SLGRWISMGA EEWDELLLSG AALASESSGE LQLVAASPAR
101: SVVFSGVQTA TNCDHMVSFA SEKDQVSMQE CSKSDAGVID FEEIGGEYWD YLFPPLV
Best Arabidopsis Sequence Match ( AT3G29280.2 )
(BLAST)
001: MDEGREGEIE KKKKKDEEGE VKEGVASIAL LPCGTISGHF IQMPSSICYG LHGTELACET ECSRGEDYRL IKLTIIDYNR KKEQTVVVEC KGHDAARIND
101: VEHAHGEYDY LSLERWEEDV IGLVEEKHGK KKVSVSFECE TLKADEAAED HIRQFMPKLA GLDAVINIGP MKISGLDFAA VEEGHIN
Arabidopsis Description
unknown protein; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT3G29280]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.