Factsheet for HORVU2Hr1G043240.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 2
extracellular 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	endoplasmic reticulum, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g039030.1.1	Tomato	endoplasmic reticulum	92.31	67.92
HORVU0Hr1G024720.1	Barley	golgi, mitochondrion	97.44	18.45
KRH30143	Soybean	cytosol, plasma membrane	92.31	15.52
HORVU5Hr1G004630.2	Barley	plasma membrane	97.44	11.55
AGP50735	Barley	extracellular, mitochondrion, plasma membrane, vacuole	97.44	10.76
HORVU2Hr1G070570.1	Barley	extracellular, mitochondrion, plasma membrane, vacuole	97.44	10.76
HORVU2Hr1G121820.5	Barley	extracellular, mitochondrion, plasma membrane, vacuole	92.31	10.2
Solyc11g013780.1.1	Tomato	cytosol, plastid	10.26	5.63
HORVU6Hr1G046820.1	Barley	cytosol, mitochondrion, plasma membrane, vacuole	7.69	1.52
Solyc11g030830.1.1	Tomato	cytosol	2.56	1.09
HORVU1Hr1G017870.1	Barley	extracellular, vacuole	0.0	0.0
HORVU2Hr1G121360.1	Barley	extracellular, mitochondrion, plastid, vacuole	0.0	0.0
HORVU3Hr1G004790.1	Barley	cytosol	0.0	0.0
VIT_11s0052g01680.t01	Wine grape	extracellular, vacuole	0.0	0.0

Protein Annotations

MapMan:35.2	UniProt:A0A287HTY9	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009772	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0016021	GO:GO:0019684	GO:GO:0045156	EnsemblPlantsGene:HORVU2Hr1G043240	EnsemblPlants:HORVU2Hr1G043240.1	InterPro:IPR036854
PFAM:PF00124	PANTHER:PTHR33149	InterPro:Photo_II_D1/D2_sf	InterPro:Photo_RC_L/M	SUPFAM:SSF81483	TMHMM:TMhelix
UniParc:UPI000B489399	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:219582477..219582869

Molecular Weight (calculated)

4354.4 Da

IEP (calculated)

9.170

GRAVY (calculated)

0.592

Length

39 amino acids

Sequence
(BLAST)

1: MGREWELSFR LGMRPWIAVA YSAPVAAATA IFLIYPIGQ

Best Arabidopsis Sequence Match ( ATCG00020.1 )
(BLAST)

001: MTAILERRES ESLWGRFCNW ITSTENRLYI GWFGVLMIPT LLTATSVFII AFIAAPPVDI DGIREPVSGS LLYGNNIISG AIIPTSAAIG LHFYPIWEAA
101: SVDEWLYNGG PYELIVLHFL LGVACYMGRE WELSFRLGMR PWIAVAYSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF NFMIVFQAEH NILMHPFHML
201: GVAGVFGGSL FSAMHGSLVT SSLIRETTEN ESANEGYRFG QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGI STMAFNLNGF
301: NFNQSVVDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAAVEAPS TNG

Arabidopsis Description

PSBAPhotosystem II protein D1 [Source:UniProtKB/Swiss-Prot;Acc:P83755]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.