Factsheet for HORVU2Hr1G078430.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G043880.1	Barley	plasma membrane	57.73	14.95
HORVU6Hr1G086570.5	Barley	plasma membrane	35.96	13.62
HORVU3Hr1G100030.1	Barley	plastid	37.54	12.93
HORVU7Hr1G043810.5	Barley	plasma membrane	53.31	12.6
HORVU5Hr1G043010.1	Barley	plasma membrane	35.96	12.53
HORVU2Hr1G006360.2	Barley	plasma membrane, vacuole	35.02	12.32
HORVU7Hr1G044100.8	Barley	cytosol, peroxisome	33.75	11.98
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	34.7	11.78
HORVU4Hr1G089880.1	Barley	plasma membrane, vacuole	36.59	11.34
HORVU7Hr1G044210.1	Barley	plasma membrane	34.07	11.18
HORVU7Hr1G044160.1	Barley	plasma membrane	33.44	11.04
HORVU7Hr1G006800.1	Barley	peroxisome	34.38	10.59
HORVU2Hr1G020740.1	Barley	plasma membrane	28.71	10.52
HORVU4Hr1G089890.1	Barley	plasma membrane, vacuole	36.28	10.11
HORVU7Hr1G043950.7	Barley	cytosol, plastid	31.23	8.63
HORVU7Hr1G021190.5	Barley	nucleus	11.67	5.29
HORVU6Hr1G091490.1	Barley	cytosol, peroxisome, plasma membrane	3.47	4.7
HORVU6Hr1G091530.1	Barley	cytosol, peroxisome	3.47	4.42
HORVU3Hr1G017270.1	Barley	plastid	2.52	4.37
HORVU2Hr1G032190.3	Barley	cytosol	3.15	4.08
HORVU1Hr1G003560.1	Barley	cytosol, plasma membrane, vacuole	2.84	3.64
HORVU6Hr1G091460.3	Barley	plasma membrane	2.84	3.47
HORVU7Hr1G044020.6	Barley	cytosol, peroxisome	2.21	2.21
HORVU7Hr1G044080.2	Barley	golgi, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU2Hr1G078430.3	EnsemblPlantsGene:HORVU2Hr1G078430	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PGG_dom
PANTHER:PTHR24177	PANTHER:PTHR24177:SF43	PFAM:PF13962	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B485D06
UniProt:A0A287IJV0	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:568157583..568160705

Molecular Weight (calculated)

35595.1 Da

IEP (calculated)

9.453

GRAVY (calculated)

0.239

Length

317 amino acids

Sequence
(BLAST)

001: MSPPGGVWSD DKEVSGTPGN PVLQHNHSKR YDVFYYSNSA TFMSSVVITI LLLNKKSCEN GIKSYALRVC LVVGLVGLLI AYAAGSCRRS KESIYLIIIV
101: AAVLKSLVIQ VLILSSTHDT VGGPWSKCME RLLKRLLRLK DRGQQTVPDQ QGSLEHDEKN ERKRHKYLML LAVLVASITY QTGLNPPGGL WYDDPNHVAG
201: NPILHDIHPW RYRTFFIFNG ISFMASIVVI MFLLEKSVRK KVVTLEVLHL IMILDLLALM TAFAAGSCRK FRTSMYMLFY TACSLKSELS VVQSVLNCSN
301: LLHLHLNCTF NKLILEC

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.