Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G218100.1 | Wheat | plasma membrane | 80.54 | 86.19 |
| TraesCS7A01G216300.1 | Wheat | plasma membrane | 81.88 | 85.71 |
| TraesCS7B01G123500.1 | Wheat | plasma membrane | 79.94 | 84.54 |
| Os06t0291800-00 | Rice | plasma membrane | 54.06 | 64.1 |
| HORVU2Hr1G078430.3 | Barley | peroxisome | 12.6 | 53.31 |
| HORVU7Hr1G044020.6 | Barley | cytosol, peroxisome | 11.33 | 47.95 |
| HORVU7Hr1G043880.1 | Barley | plasma membrane | 39.67 | 43.46 |
| HORVU5Hr1G043010.1 | Barley | plasma membrane | 27.89 | 41.1 |
| HORVU6Hr1G086570.5 | Barley | plasma membrane | 24.09 | 38.59 |
| HORVU7Hr1G043950.7 | Barley | cytosol, plastid | 32.89 | 38.45 |
| HORVU7Hr1G044210.1 | Barley | plasma membrane | 26.47 | 36.75 |
| HORVU7Hr1G044160.1 | Barley | plasma membrane | 26.25 | 36.67 |
| HORVU7Hr1G044080.2 | Barley | golgi, plasma membrane | 11.71 | 35.6 |
| HORVU3Hr1G100030.1 | Barley | plastid | 23.94 | 34.89 |
| HORVU7Hr1G044100.8 | Barley | cytosol, peroxisome | 22.74 | 34.15 |
| HORVU6Hr1G086440.7 | Barley | golgi, plasma membrane | 23.56 | 33.83 |
| HORVU4Hr1G089880.1 | Barley | plasma membrane, vacuole | 25.35 | 33.24 |
| HORVU2Hr1G020740.1 | Barley | plasma membrane | 21.1 | 32.72 |
| HORVU2Hr1G006360.2 | Barley | plasma membrane, vacuole | 20.66 | 30.74 |
| HORVU4Hr1G089890.1 | Barley | plasma membrane, vacuole | 25.8 | 30.4 |
| HORVU6Hr1G091490.1 | Barley | cytosol, peroxisome, plasma membrane | 5.29 | 30.34 |
| HORVU7Hr1G006800.1 | Barley | peroxisome | 22.07 | 28.77 |
| HORVU3Hr1G017270.1 | Barley | plastid | 3.73 | 27.32 |
| HORVU6Hr1G091530.1 | Barley | cytosol, peroxisome | 5.0 | 26.91 |
| HORVU7Hr1G021190.5 | Barley | nucleus | 13.65 | 26.14 |
| HORVU6Hr1G091460.3 | Barley | plasma membrane | 4.62 | 23.94 |
| HORVU2Hr1G032190.3 | Barley | cytosol | 4.03 | 22.04 |
| HORVU1Hr1G003560.1 | Barley | cytosol, plasma membrane, vacuole | 3.28 | 17.81 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G043810.5 | EnsemblPlantsGene:HORVU7Hr1G043810 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PGG_dom |
| ncoils:Coil | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF43 | PFAM:PF13962 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000B4713C2 | UniProt:A0A287W9R9 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:135052907..135057074
Molecular Weight (calculated)
145365.0 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.106
Length
1341 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIEGGSHMQP QPGNGRTANG EQPEPAAIPM NGVAASGPGN GQTADEAADS GEAEDIEAAT DVNGQGSSSR SAVASSHESR IKGDFEFLWR LRKYLLLLAV
0101: LAVGVTYNAG LSPPGGFQMD DKLDRHAGDP LLPLRFFRRY QAFFYCNATA FAASLVLIIL LLSRGVASKH VWLRSMQFTM ILDLFSLMGA YAAGSCRALR
0201: SSVYILVLVC SVFVYVGVHI LLFMRVVPQP LKEQVQKTRR LILKKLQRML NKVPSMCSVS DSDGQRSSRD HKREIEEARK FILMLATFAA TITYQAGISP
0301: PGGFWGVNDH GHRPATFVLR KHNLLRFNIF TCCNATSFVA SLVTVILLLS TELSTHGIRT QALFVCVLVD LLGLIGAYAS GSCRDVATSL SVVLIISVVL
0401: ICVVILVICL HSKTVTVWMD KSLKPAFEKV LSMLSLPGQD DSPRTHQQCT ELHCQRNRHQ DTQLDSQRTH QQDTELDSQR IHQHDTELDS QGTQQQXXXX
0501: XXXXXXXXXX XXXXXXXXXQ DTELDSQRIH QHDTELDSQR IRQKDTELDS QRIRQQDTEL DSQRTQQQDT ELDSQRIRQQ DTELDSQRTQ QQATGHVVRD
0601: TEVEGGMSNL QFHPADSNLV STGDVISASA SDLNSMEDIM STTLHQSHDQ SEQAATKAVC SSSTNALTTE EVPMYNIETQ SACNRQVAIP MALPSSSDGR
0701: KSIQGILPLQ GLVDQNGASG NRRINADDPA MGCELPDSHG DSTEQNSQPM SNNSTGADDD EVRLEIDRTT NDQATRHQRS IYCSCRNPDD ARLKKSRTYL
0801: LLLAILAVSL TYQAGLNPPG GFWTSNATKH SAGDPILGDS GGFWTSNGTK HSAGDPILED SYHKRYLAFF YFNATAFAAS LVMIVMLLSS KMSNKVIKRR
0901: ALQTAMITDL LALMGAFVVG SCREKTKSIY ISVVIFIVVL YVPLHVLVFR HNGWLKDCVA QRMKFAQPKS LQTDNELRDA NAKDLERRRN LLFILAILAA
1001: TVTYQAGLNP PGGIWPDENS KGGTPGNPVL QDSHPDRYDV FYYSNAVSFV SSVSVIILLV NRESCEDGIK SYAIRMCLVA GLLGLLVAYS AGTCRKARPV
1101: IYLIVIASAV LTCLVIQFLI LSSTQDALDG PLTWLRKWLR KILHVESDSE TPLDSSDEEK KESNSQGSGP HTSEKKEKKR QKYLMLLSVL AASIAYQAGL
1201: NPPGGFWPDD TPGGYKAGNP VLKDIHLWRY MVFFVFNSIS FMSSIAVVML LLSKSVRQRK VPLQALHFIM ILDLLALMTA YAAGSCRKFR TSIFILVVVC
1301: CVLVYLVVVI ILSSGIARWL KKQKRKVTSL LEPSPVAATS A
0101: LAVGVTYNAG LSPPGGFQMD DKLDRHAGDP LLPLRFFRRY QAFFYCNATA FAASLVLIIL LLSRGVASKH VWLRSMQFTM ILDLFSLMGA YAAGSCRALR
0201: SSVYILVLVC SVFVYVGVHI LLFMRVVPQP LKEQVQKTRR LILKKLQRML NKVPSMCSVS DSDGQRSSRD HKREIEEARK FILMLATFAA TITYQAGISP
0301: PGGFWGVNDH GHRPATFVLR KHNLLRFNIF TCCNATSFVA SLVTVILLLS TELSTHGIRT QALFVCVLVD LLGLIGAYAS GSCRDVATSL SVVLIISVVL
0401: ICVVILVICL HSKTVTVWMD KSLKPAFEKV LSMLSLPGQD DSPRTHQQCT ELHCQRNRHQ DTQLDSQRTH QQDTELDSQR IHQHDTELDS QGTQQQXXXX
0501: XXXXXXXXXX XXXXXXXXXQ DTELDSQRIH QHDTELDSQR IRQKDTELDS QRIRQQDTEL DSQRTQQQDT ELDSQRIRQQ DTELDSQRTQ QQATGHVVRD
0601: TEVEGGMSNL QFHPADSNLV STGDVISASA SDLNSMEDIM STTLHQSHDQ SEQAATKAVC SSSTNALTTE EVPMYNIETQ SACNRQVAIP MALPSSSDGR
0701: KSIQGILPLQ GLVDQNGASG NRRINADDPA MGCELPDSHG DSTEQNSQPM SNNSTGADDD EVRLEIDRTT NDQATRHQRS IYCSCRNPDD ARLKKSRTYL
0801: LLLAILAVSL TYQAGLNPPG GFWTSNATKH SAGDPILGDS GGFWTSNGTK HSAGDPILED SYHKRYLAFF YFNATAFAAS LVMIVMLLSS KMSNKVIKRR
0901: ALQTAMITDL LALMGAFVVG SCREKTKSIY ISVVIFIVVL YVPLHVLVFR HNGWLKDCVA QRMKFAQPKS LQTDNELRDA NAKDLERRRN LLFILAILAA
1001: TVTYQAGLNP PGGIWPDENS KGGTPGNPVL QDSHPDRYDV FYYSNAVSFV SSVSVIILLV NRESCEDGIK SYAIRMCLVA GLLGLLVAYS AGTCRKARPV
1101: IYLIVIASAV LTCLVIQFLI LSSTQDALDG PLTWLRKWLR KILHVESDSE TPLDSSDEEK KESNSQGSGP HTSEKKEKKR QKYLMLLSVL AASIAYQAGL
1201: NPPGGFWPDD TPGGYKAGNP VLKDIHLWRY MVFFVFNSIS FMSSIAVVML LLSKSVRQRK VPLQALHFIM ILDLLALMTA YAAGSCRKFR TSIFILVVVC
1301: CVLVYLVVVI ILSSGIARWL KKQKRKVTSL LEPSPVAATS A
001: MEINGQEGHR YEESSSEWFV KYLKRQGDWL EKTRGNLMVT ATVIAGMSFQ VMVNPPGGVW QSDNCSFGNQ TGTAPFCKGR AGTAVLEYES SKRIAYIGMI
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
Arabidopsis Description
AT3G13950 protein [Source:UniProtKB/TrEMBL;Acc:B9DG91]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.