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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G435200.1 Wheat cytosol, peroxisome, plasma membrane 92.73 92.34
TraesCS6D01G380500.1 Wheat cytosol, peroxisome, plasma membrane 91.45 91.06
TraesCS6A01G395200.1 Wheat cytosol, peroxisome, plasma membrane 91.45 91.06
TraesCS6B01G435400.1 Wheat mitochondrion 90.6 84.8
HORVU6Hr1G091530.1 Barley cytosol, peroxisome 61.54 57.83
HORVU6Hr1G091460.3 Barley plasma membrane 50.0 45.17
Os04t0168400-01 Rice endoplasmic reticulum, golgi, plasma membrane 17.09 21.74
HORVU3Hr1G017270.1 Barley plastid 11.97 15.3
HORVU2Hr1G032190.3 Barley cytosol 14.1 13.47
HORVU7Hr1G044080.2 Barley golgi, plasma membrane 21.37 11.34
HORVU1Hr1G003560.1 Barley cytosol, plasma membrane, vacuole 9.4 8.91
HORVU7Hr1G021190.5 Barley nucleus 24.36 8.14
HORVU6Hr1G086570.5 Barley plasma membrane 29.06 8.12
HORVU2Hr1G020740.1 Barley plasma membrane 27.78 7.51
HORVU3Hr1G100030.1 Barley plastid 29.49 7.5
HORVU6Hr1G086440.7 Barley golgi, plasma membrane 28.63 7.17
HORVU5Hr1G043010.1 Barley plasma membrane 27.78 7.14
HORVU7Hr1G044210.1 Barley plasma membrane 29.49 7.14
HORVU2Hr1G006360.2 Barley plasma membrane, vacuole 26.92 6.99
HORVU7Hr1G044100.8 Barley cytosol, peroxisome 26.5 6.94
HORVU7Hr1G044160.1 Barley plasma membrane 27.78 6.77
HORVU4Hr1G089880.1 Barley plasma membrane, vacuole 28.63 6.55
HORVU7Hr1G006800.1 Barley peroxisome 27.35 6.22
HORVU4Hr1G089890.1 Barley plasma membrane, vacuole 27.35 5.62
HORVU7Hr1G043810.5 Barley plasma membrane 30.34 5.29
HORVU7Hr1G043880.1 Barley plasma membrane 24.36 4.66
HORVU7Hr1G043950.7 Barley cytosol, plastid 20.94 4.27
HORVU2Hr1G078430.3 Barley peroxisome 4.7 3.47
HORVU7Hr1G044020.6 Barley cytosol, peroxisome 4.27 3.15
Protein Annotations
EnsemblPlants:HORVU6Hr1G091490.1EnsemblPlantsGene:HORVU6Hr1G091490InterPro:PGG_domPANTHER:PTHR24177PANTHER:PTHR24177:SF15PFAM:PF13962
SEG:segTMHMM:TMhelixUniParc:UPI000295C4C9UniProt:M0W3T3MapMan:35.2:
Description
No Description!
Coordinates
chrchr6H:+:575686817..575690232
Molecular Weight (calculated)
25950.6 Da
IEP (calculated)
9.941
GRAVY (calculated)
0.186
Length
234 amino acids
Sequence
(BLAST)
001: MSEADKANRV AISSGDSSQS QPQEIITVNN RPHMSVDELL KAIKGANGKP VLFVPSSDGR LAAVAVDGLH QNLVPANSFS EKRNQQDFRA WLLLLTSLVA
101: TVTFTAGLAP PGGFWDADDR ANRHIAGTSI MRDKFPRRYL VFYYSNTTAF FASLMIIGML AKNVYSKETV VLKNRIFVAL VGLCFVSLGT SYITGTWVSP
201: KGGVYNIVMF VLVICYMTMH WVLDFIVWMQ RRAT
Best Arabidopsis Sequence Match ( AT5G54710.2 )
(BLAST)
001: MKIIDLCPSL VSVTNVDGNT PLHLAAEIGN ESILWKMLRC GRADCMKINK QGQTAFILAC LNNHLDAALT LVENMRSMTM VELDAAFTGQ QPVIIDKMLE
101: KFPSLVLDVD EEQSTLLHKA VTQRNEEYAT KVIDLCPSLV SVTNVDGNTP LHLAAEIGNI NILWKMLETG EAECMKINKQ GQTAFILACL NNNVNSARIL
201: VEGTSSMTMV ELNAAFSEQQ QVIIDSILEK FPNLILDADE EQSTLLHKAC KSGNLEMART LLDVDVNQEI AEKVDKDGLT PLHRAVINGS VEILKEFLCK
301: APSSFNITTQ GTIETVFHLA AKYQKTKAFI FMAQSANIRQ LLYSLDAEDN TVLHVAASVD STSLVRHILS ETTIDVTLKN KKGFAAVDLI DKEGVDFPLL
401: SLWFRDEAEK IQRPARYVKF AHEPVELIRN TNNGEKLSSE SRAMDLLREG RDPRNKEREM HSESLQNARN TITIVAVLIA SVAFTCGINP PGGVHQDGPF
501: IGKATAGRTL AFKIFSVANN IALFTSLSIV TLLVSIISYR TKALKMCVVI AHKMMWLAVA SMATAYAASA WITVPHNEGS KWLVYTTSAI ASVALGSMFV
601: YVSFMMVKHI LKKDKLRRNQ SHGKTPSTTL DMEAAGDVGC YWF
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT5G54710]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.