Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G435200.1 | Wheat | cytosol, peroxisome, plasma membrane | 94.47 | 94.47 |
| TraesCS6A01G395200.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.19 | 93.19 |
| HORVU6Hr1G091490.1 | Barley | cytosol, peroxisome, plasma membrane | 91.06 | 91.45 |
| TraesCS6D01G380800.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.34 | 52.79 |
| TraesCS6D01G380600.1 | Wheat | peroxisome | 48.09 | 49.78 |
| Os04t0168400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 16.6 | 21.2 |
| TraesCS2D01G000400.1 | Wheat | plasma membrane, plastid | 11.49 | 14.92 |
| TraesCS2D01G180100.1 | Wheat | cytosol, peroxisome, vacuole | 14.47 | 13.71 |
| TraesCS7D01G216100.1 | Wheat | cytosol, peroxisome, plasma membrane | 16.6 | 13.68 |
| TraesCS2D01G180000.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 14.04 | 13.04 |
| TraesCS3D01G540400.1 | Wheat | cytosol, peroxisome, plasma membrane | 13.19 | 12.6 |
| TraesCS6D01G346900.1 | Wheat | mitochondrion, plasma membrane | 21.7 | 8.73 |
| TraesCS6D01G346300.1 | Wheat | plasma membrane | 27.23 | 8.73 |
| TraesCS3D01G466700.1 | Wheat | plasma membrane | 31.06 | 8.33 |
| TraesCS6D01G346600.1 | Wheat | plasma membrane | 28.94 | 7.96 |
| TraesCS6D01G346800.1 | Wheat | nucleus, peroxisome, plasma membrane | 29.36 | 7.89 |
| TraesCS7D01G218900.1 | Wheat | peroxisome | 28.09 | 7.76 |
| TraesCS7D01G219600.1 | Wheat | plasma membrane | 25.96 | 7.7 |
| TraesCS6D01G346400.1 | Wheat | plasma membrane | 28.94 | 7.65 |
| TraesCS7D01G219200.1 | Wheat | peroxisome | 23.83 | 7.58 |
| TraesCS7D01G147300.1 | Wheat | plasma membrane | 28.09 | 7.57 |
| TraesCS7D01G218700.1 | Wheat | plasma membrane | 29.79 | 7.5 |
| TraesCS7D01G219000.1 | Wheat | peroxisome | 27.66 | 7.46 |
| TraesCS4D01G343500.2 | Wheat | plasma membrane | 29.79 | 7.45 |
| TraesCS7D01G219100.1 | Wheat | peroxisome | 27.23 | 7.42 |
| TraesCS5D01G140600.1 | Wheat | plasma membrane | 27.23 | 7.37 |
| TraesCS7D01G035200.1 | Wheat | plasma membrane | 29.79 | 7.37 |
| TraesCS6D01G337000.1 | Wheat | plasma membrane | 28.09 | 7.3 |
| TraesCS2D01G040400.1 | Wheat | plasma membrane | 28.09 | 7.29 |
| TraesCS7D01G034500.1 | Wheat | plasma membrane | 28.51 | 7.05 |
| TraesCS6D01G346500.2 | Wheat | plasma membrane | 27.66 | 7.04 |
| TraesCS7D01G219400.1 | Wheat | peroxisome | 28.51 | 6.96 |
| TraesCS7D01G034600.1 | Wheat | plasma membrane | 29.36 | 6.91 |
| TraesCS7D01G034700.1 | Wheat | plasma membrane | 27.66 | 6.78 |
| TraesCS7D01G128400.1 | Wheat | mitochondrion | 29.36 | 6.78 |
| TraesCS7D01G218600.1 | Wheat | plasma membrane | 25.96 | 6.74 |
| TraesCS7D01G091400.1 | Wheat | plasma membrane | 27.66 | 6.74 |
| TraesCS7D01G219500.1 | Wheat | peroxisome | 22.98 | 6.32 |
| TraesCS2D01G482300.1 | Wheat | plasma membrane | 28.09 | 6.32 |
| TraesCS4D01G348800.1 | Wheat | plasma membrane | 22.98 | 6.26 |
| TraesCS6D01G347000.1 | Wheat | plasma membrane | 5.53 | 5.56 |
| TraesCS7D01G218400.1 | Wheat | nucleus, peroxisome, plasma membrane | 26.81 | 5.29 |
| TraesCS7D01G218100.1 | Wheat | plasma membrane | 28.09 | 5.27 |
| TraesCS7D01G218300.1 | Wheat | plasma membrane | 23.83 | 4.99 |
| TraesCS7D01G218200.1 | Wheat | plasma membrane, plastid | 22.55 | 4.79 |
| TraesCS2D01G040500.1 | Wheat | plasma membrane | 6.38 | 3.18 |
| TraesCS7D01G219300.1 | Wheat | extracellular, plasma membrane, plastid, vacuole | 2.13 | 2.82 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G380500.1 | EnsemblPlantsGene:TraesCS6D01G380500 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF51 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:461460642..461461349
Molecular Weight (calculated)
26046.7 Da
IEP (calculated)
9.043
GRAVY (calculated)
0.207
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEGDKANTV AISSGDSSQS QPQEMITIDN QRPHMSVDDL LKAIKGANGM PVLFIPSSDG RLAAVAVDGL HPNLVPANSI SEKKNQQDFR AWLLLLTSLV
101: ATVTFTAGLA PPGGFWDADD RANRHIAGTS IMRDKFPRMY LVFYYSNTTA FFTSLMIIGM LAKNVYNKET VVLKNRFFLA LVGLCFVTLG TSYITGTWVS
201: PRGGVYNIVM FVVVICYMSM HWVLDFIVWM QRRAT
101: ATVTFTAGLA PPGGFWDADD RANRHIAGTS IMRDKFPRMY LVFYYSNTTA FFTSLMIIGM LAKNVYNKET VVLKNRFFLA LVGLCFVTLG TSYITGTWVS
201: PRGGVYNIVM FVVVICYMSM HWVLDFIVWM QRRAT
001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.