Factsheet for TraesCS6D01G346400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G396800.1	Wheat	plasma membrane	93.93	93.93
TraesCS6B01G398200.1	Wheat	plasma membrane	93.59	93.69
TraesCS6A01G363200.1	Wheat	plasma membrane	93.14	93.14
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	47.58	72.43
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	70.64	71.85
TraesCS6D01G346500.2	Wheat	plasma membrane	74.47	71.72
TraesCS6D01G346600.1	Wheat	plasma membrane	67.72	70.49
TraesCS6D01G347000.1	Wheat	plasma membrane	18.34	69.66
TraesCS6D01G346300.1	Wheat	plasma membrane	56.58	68.62
TraesCS7D01G147300.1	Wheat	plasma membrane	58.94	60.09
TraesCS7D01G218900.1	Wheat	peroxisome	55.68	58.17
TraesCS7D01G219000.1	Wheat	peroxisome	55.91	57.06
Zm00001d012387_P001	Maize	plasma membrane	33.86	57.01
TraesCS7D01G219100.1	Wheat	peroxisome	55.12	56.84
Zm00001d028649_P001	Maize	plasma membrane	54.56	53.65
Os06t0296700-01	Rice	plasma membrane	50.28	52.53
TraesCS3D01G466700.1	Wheat	plasma membrane	46.01	46.69
TraesCS7D01G218600.1	Wheat	plasma membrane	46.79	45.97
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	31.27	45.5
Os06t0296100-00	Rice	plasma membrane	44.21	44.81
TraesCS7D01G218700.1	Wheat	plasma membrane	46.91	44.69
TraesCS7D01G219200.1	Wheat	peroxisome	35.32	42.49
TraesCS7D01G035200.1	Wheat	plasma membrane	44.88	42.0
TraesCS6D01G337000.1	Wheat	plasma membrane	41.96	41.26
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	8.1	40.68
TraesCS7D01G034500.1	Wheat	plasma membrane	43.42	40.59
TraesCS2D01G040400.1	Wheat	plasma membrane	41.06	40.33
TraesCS7D01G034700.1	Wheat	plasma membrane	43.19	40.08
TraesCS7D01G034600.1	Wheat	plasma membrane	44.43	39.58
TraesCS5D01G140600.1	Wheat	plasma membrane	37.8	38.71
TraesCS2D01G040500.1	Wheat	plasma membrane	20.14	37.92
TraesCS4D01G348800.1	Wheat	plasma membrane	36.22	37.35
TraesCS4D01G343500.2	Wheat	plasma membrane	39.37	37.27
TraesCS7D01G091400.1	Wheat	plasma membrane	38.92	35.85
TraesCS7D01G128400.1	Wheat	mitochondrion	40.16	35.07
TraesCS2D01G482300.1	Wheat	plasma membrane	40.94	34.87
TraesCS7D01G219600.1	Wheat	plasma membrane	30.03	33.71
TraesCS7D01G219400.1	Wheat	peroxisome	36.0	33.23
TraesCS7D01G219500.1	Wheat	peroxisome	30.48	31.73
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	8.66	31.05
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.3	30.94
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.55	30.04
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	9.34	29.12
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	7.65	28.94
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	7.54	27.24
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	7.09	27.04
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	35.88	26.78
TraesCS6D01G380600.1	Wheat	peroxisome	6.75	26.43
TraesCS7D01G218300.1	Wheat	plasma membrane	33.18	26.29
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	32.51	26.11
TraesCS7D01G218100.1	Wheat	plasma membrane	35.32	25.06

Protein Annotations

EnsemblPlants:TraesCS6D01G346400.1	EnsemblPlantsGene:TraesCS6D01G346400	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:-:445810258..445813027

Molecular Weight (calculated)

97728.6 Da

IEP (calculated)

9.139

GRAVY (calculated)

0.238

Length

889 amino acids

Sequence
(BLAST)

001: MECGGVSAVQ VQPAVHMGQP GQPAKPPVQP WEYSLRKYLL LLAALVVTVT YAAGFSPPGG VWQAAHDGQP AGDPIIRGTH YRRYLAFFYC NATAFAASLV
101: VIVLILILAV RHDKKGKDSR WVVVPLRLVM VLDLLSLMGA YGAGTCQDKI SIVYSAVLVA AVFLYVAVLK MMDWWCPDNK TGPGCDGTMS SAPNSNSNSG
201: DVMSTPDPDS DAVTIPSPLR DSDPNVKEEE DRKREALKKL KANERLRKVL MLLATFAVSI TYVAGLSMPG GFWDSTGTSY RPGDAILKDR HRPRLTAFLL
301: CNTTSFVASL LIIMLLIIDG KKLRDKKARS LVLYGFIVVA LVSLVGAYTA GSCRETKTTI YVVSLTGGIL AMAYILLYAF YTLKSSRSSP TQPTDALQQT
401: TDNVSARKGL DKARSLVLLL ATLAATITYT AGLDPPGGLW QDKGDGYIAG DPILITTNIR RYRAFYYCNS VAFVASLLVI VLVQTERLIK HHVLEAAMIL
501: DLFGLIGAYA AGSCRNVNSS VYVMALAGAA LIYVVIHIVF FTLELDQKDK KDDDQEDELL EKRRKRLLLF AILAATITYQ AGLTPPGGFL LQDDTLGHHA
601: GDPILLHNYP VRYHAFFYCN SVSFMLSIAL IILLVNPNLY RPAIQSNALS VCTAVGLFCL MGAYAAGSTQ HRKTSIYIFV LVAVVLLVAA GLLLVFLLKR
701: KLSNAVVSPP REQNEEERKE VEEKNEDEEE AKKHARRKYL MLLGILVASV AYQAGLEPPG GAWQNNDNGY EAGNPVMNDN RRPRYLTFFY SNSVSFVASI
801: VVIIMLLPQW LPKKKEGEWE KWSLRVMNWM IRLDLFALLV AYAAGSNRGL KTSLYVVALI FAVLGYFAIH TVLACTVCRH ERRQSSSVV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.