Factsheet for TraesCS6B01G398200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G396800.1	Wheat	plasma membrane	95.95	95.84
TraesCS6D01G346400.1	Wheat	plasma membrane	93.69	93.59
TraesCS6A01G363200.1	Wheat	plasma membrane	91.44	91.34
TraesCS6B01G397300.1	Wheat	plasma membrane	68.69	71.68
TraesCS6B01G397000.1	Wheat	plasma membrane	67.79	71.24
TraesCS6B01G398100.1	Wheat	plasma membrane	73.99	70.87
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	49.1	70.55
TraesCS6B01G396900.1	Wheat	plasma membrane	73.65	70.4
TraesCS6B01G398300.1	Wheat	plasma membrane	69.26	69.81
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.83	68.63
TraesCS6B01G397400.1	Wheat	plasma membrane	62.73	68.01
TraesCS6B01G396700.1	Wheat	plasma membrane	70.16	66.77
TraesCS6B01G397900.1	Wheat	cytosol, plastid	58.9	64.73
TraesCS7B01G048200.1	Wheat	plasma membrane	45.83	57.81
Zm00001d012387_P001	Maize	plasma membrane	34.23	57.58
Zm00001d028649_P001	Maize	plasma membrane	55.29	54.31
TraesCS7B01G124400.1	Wheat	plasma membrane	56.64	54.14
Os06t0296700-01	Rice	plasma membrane	50.23	52.41
TraesCS3B01G513700.1	Wheat	plasma membrane	40.2	47.16
TraesCS7B01G124200.1	Wheat	plasma membrane	47.41	46.52
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	31.87	46.32
TraesCS7B01G124300.1	Wheat	plasma membrane	47.64	45.39
TraesCS2B01G139800.1	Wheat	plasma membrane	43.13	45.38
Os06t0296100-00	Rice	plasma membrane	44.03	44.58
TraesCS2B01G054300.1	Wheat	plasma membrane	25.23	41.95
TraesCS2B01G054200.1	Wheat	plasma membrane	41.1	41.76
TraesCS6B01G387600.1	Wheat	plasma membrane	41.55	41.32
TraesCS2B01G199100.1	Wheat	plastid	6.31	40.29
TraesCS4B01G387200.1	Wheat	plasma membrane	23.76	39.96
TraesCS2B01G065700.1	Wheat	plasma membrane	30.29	39.91
TraesCS5B01G345200.1	Wheat	plasma membrane	10.7	39.42
TraesCS6B01G003300.1	Wheat	plasma membrane	39.75	39.31
TraesCS7B01G029500.1	Wheat	plasma membrane	31.87	38.98
TraesCS5B01G132500.1	Wheat	plasma membrane	38.85	38.04
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	29.5	38.03
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	10.02	35.32
TraesCS7B01G124800.1	Wheat	peroxisome	25.23	35.22
TraesCS2B01G508600.1	Wheat	plasma membrane	40.77	35.01
TraesCS3B01G595400.1	Wheat	plasma membrane	33.67	34.77
TraesCS7B01G124500.1	Wheat	plasma membrane	36.15	32.99
TraesCS6B01G397700.1	Wheat	plasma membrane	7.55	32.68
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	6.19	32.16
TraesCS7B01G124700.1	Wheat	plasma membrane	35.92	31.77
TraesCS7B01G124600.1	Wheat	plasma membrane	36.15	31.26
TraesCS2B01G023700.1	Wheat	vacuole	5.63	31.25
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	8.56	30.28
TraesCS6B01G435700.1	Wheat	plasma membrane	8.11	29.88
TraesCS6B01G016300.1	Wheat	plastid	5.41	29.27
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.66	28.94
TraesCS6B01G435100.1	Wheat	plastid	7.09	27.04
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	36.37	27.03
TraesCS7B01G123700.1	Wheat	plasma membrane	34.68	26.69
TraesCS6B01G435400.1	Wheat	mitochondrion	7.43	26.4
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	34.91	25.33
TraesCS6B01G435300.1	Wheat	plasma membrane	6.53	24.47
TraesCS7B01G123500.1	Wheat	plasma membrane	34.68	24.29
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.42	24.15
TraesCS6B01G436000.1	Wheat	plasma membrane	6.42	23.85
TraesCS7B01G124000.1	Wheat	plasma membrane	20.95	21.75
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	6.19	20.83
TraesCS6B01G436200.1	Wheat	cytosol	5.97	16.21

Protein Annotations

EnsemblPlants:TraesCS6B01G398200.1	EnsemblPlantsGene:TraesCS6B01G398200	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:+:673696337..673699082

Molecular Weight (calculated)

97693.4 Da

IEP (calculated)

9.202

GRAVY (calculated)

0.244

Length

888 amino acids

Sequence
(BLAST)

001: MECGGISAVQ VQPAAPMDQP GQPAKPPVQP WEYSLRKYLL LLAALVVTVT YAAGFSPPGG VWQTAHDGQP AGDPIIRGTH YRRYLAFFYC NATAFAASLV
101: VIVLILILAV RHDKKGKDSR WVVVPLRLVM VLDLLSLMGA YGAGTCQDKV CIVYSAVLVA AVFLYIAVLK MMDWWGPDNK SGSGCDGTMS TAPNRNSNFD
201: GVMSTPNPDS DPGTISSPVR DSDPNVREEE DRKREALKKL KADERLRKVL MLLATFAVSI TYVAGLSTPG GFWDTTGISY RPGDAILKDR HRPRLTVFLL
301: CNTTSFVASL LIIMLLIIDG KKLREKKARS LVLYGFIVVA LVSLVGAYTA GSCRETKTTI YVVSLAGGIL ATAYILLYAF YTLKSSRSSP TQQIDAIQQT
401: TDNVSARKGL DKARSLVLLL ATLAATITYT AGLDPPGGVW QDKGDGYIAG DPILITTNIR RYRAFYYCNS VAFVASLVVI VLVQTERLIK HHVLEAAMIL
501: DLFGLIGAYA AGSCRGVNSS IYVMALAGAA LIYVVIHIVF FTLELDHKDK KDDDEDELLE KRRKRLLLFA ILAATITFQA GLTPPGGFLL QDDTLGHHAG
601: DPILLHNYQV RYYAFFYCNS VSFMLSIALI ILLVNPNLYR PAIRSNALSV CTAVGLFCLM GAYAAGSTQH RKTSIYIFVL VAVVLLVAAG LLLVFLLKRK
701: RSNAVVAPPR EQNEEERKEV EEKNEDEEEA KKHAGRKYLM LLGILVASVA YQAGLEPPGG AWQNNDNGYE AGNPVMHDNR RARYLAFFYS NSISFVASIV
801: VIIMLLPQWL PKKKEGEWEK WSLRVMNWTI RLDLFALLVA YAAGSNRGWK TSVYVVALVF AVLSYFAIHT VLACTVCRRE RHQSSSVV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.