Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G218200.1 | Wheat | plasma membrane, plastid | 84.31 | 93.22 |
| TraesCS7B01G123700.1 | Wheat | plasma membrane | 79.98 | 84.84 |
| TraesCS7B01G124000.1 | Wheat | plasma membrane | 55.47 | 79.42 |
| HORVU7Hr1G043950.7 | Barley | cytosol, plastid | 67.97 | 72.54 |
| Os06t0292100-00 | Rice | plasma membrane | 48.61 | 63.98 |
| TraesCS7B01G123900.1 | Wheat | nucleus, peroxisome, plasma membrane | 53.92 | 55.23 |
| OQU76264 | Sorghum | plasma membrane | 51.47 | 51.98 |
| TraesCS7B01G123500.1 | Wheat | plasma membrane | 42.81 | 41.32 |
| TraesCS5B01G132500.1 | Wheat | plasma membrane | 28.27 | 38.15 |
| TraesCS6B01G397000.1 | Wheat | plasma membrane | 25.33 | 36.69 |
| TraesCS6B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 11.03 | 36.19 |
| TraesCS5B01G345200.1 | Wheat | plasma membrane | 7.11 | 36.1 |
| TraesCS6B01G397300.1 | Wheat | plasma membrane | 25.0 | 35.96 |
| TraesCS6B01G397100.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 17.89 | 35.44 |
| TraesCS6B01G396800.1 | Wheat | plasma membrane | 25.65 | 35.32 |
| TraesCS6B01G398200.1 | Wheat | plasma membrane | 25.33 | 34.91 |
| TraesCS7B01G124800.1 | Wheat | peroxisome | 17.89 | 34.43 |
| TraesCS4B01G387200.1 | Wheat | plasma membrane | 14.79 | 34.28 |
| TraesCS7B01G029500.1 | Wheat | plasma membrane | 20.18 | 34.02 |
| TraesCS6B01G398100.1 | Wheat | plasma membrane | 25.74 | 33.98 |
| TraesCS6B01G398300.1 | Wheat | plasma membrane | 24.43 | 33.94 |
| TraesCS6B01G396900.1 | Wheat | plasma membrane | 25.57 | 33.69 |
| TraesCS7B01G124200.1 | Wheat | plasma membrane | 24.75 | 33.48 |
| TraesCS7B01G124500.1 | Wheat | plasma membrane | 26.39 | 33.2 |
| TraesCS6B01G397900.1 | Wheat | cytosol, plastid | 21.9 | 33.17 |
| TraesCS3B01G513700.1 | Wheat | plasma membrane | 20.42 | 33.03 |
| TraesCS3B01G595400.1 | Wheat | plasma membrane | 23.12 | 32.91 |
| TraesCS6B01G397400.1 | Wheat | plasma membrane | 21.81 | 32.6 |
| TraesCS7B01G048200.1 | Wheat | plasma membrane | 18.63 | 32.39 |
| TraesCS6B01G387600.1 | Wheat | plasma membrane | 23.53 | 32.25 |
| TraesCS2B01G054300.1 | Wheat | plasma membrane | 14.05 | 32.21 |
| TraesCS6B01G003300.1 | Wheat | plasma membrane | 23.45 | 31.96 |
| TraesCS6B01G396700.1 | Wheat | plasma membrane | 24.35 | 31.94 |
| TraesCS7B01G124300.1 | Wheat | plasma membrane | 24.26 | 31.87 |
| TraesCS7B01G124400.1 | Wheat | plasma membrane | 24.02 | 31.65 |
| TraesCS2B01G139800.1 | Wheat | plasma membrane | 21.65 | 31.4 |
| TraesCS2B01G054200.1 | Wheat | plasma membrane | 22.06 | 30.89 |
| TraesCS7B01G124700.1 | Wheat | plasma membrane | 25.33 | 30.88 |
| TraesCS2B01G508600.1 | Wheat | plasma membrane | 25.98 | 30.75 |
| TraesCS7B01G124600.1 | Wheat | plasma membrane | 25.49 | 30.38 |
| TraesCS2B01G030400.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 6.05 | 29.37 |
| TraesCS2B01G065700.1 | Wheat | plasma membrane | 16.01 | 29.08 |
| TraesCS2B01G030300.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.77 | 28.01 |
| TraesCS6B01G397700.1 | Wheat | plasma membrane | 4.66 | 27.8 |
| TraesCS2B01G199100.1 | Wheat | plastid | 3.02 | 26.62 |
| TraesCS6B01G435700.1 | Wheat | plasma membrane | 4.74 | 24.07 |
| TraesCS2B01G023700.1 | Wheat | vacuole | 3.1 | 23.75 |
| TraesCS6B01G435200.1 | Wheat | cytosol, peroxisome, plasma membrane | 4.49 | 23.4 |
| TraesCS1B01G041800.1 | Wheat | extracellular, plasma membrane, vacuole | 3.19 | 22.81 |
| TraesCS6B01G435300.1 | Wheat | plasma membrane | 4.41 | 22.78 |
| TraesCS6B01G435600.1 | Wheat | cytosol, peroxisome, plasma membrane | 4.25 | 22.03 |
| TraesCS2B01G199200.1 | Wheat | cytosol, peroxisome, vacuole | 4.41 | 21.51 |
| TraesCS6B01G435400.1 | Wheat | mitochondrion | 4.33 | 21.2 |
| TraesCS6B01G016300.1 | Wheat | plastid | 2.78 | 20.73 |
| TraesCS6B01G435100.1 | Wheat | plastid | 3.84 | 20.17 |
| TraesCS6B01G436000.1 | Wheat | plasma membrane | 3.92 | 20.08 |
| TraesCS6B01G436100.1 | Wheat | cytosol, peroxisome, plasma membrane | 3.92 | 18.18 |
| TraesCS6B01G436200.1 | Wheat | cytosol | 3.84 | 14.37 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G123600.1 | EnsemblPlantsGene:TraesCS7B01G123600 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF43 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:144733077..144736751
Molecular Weight (calculated)
134646.0 Da
IEP (calculated)
8.241
GRAVY (calculated)
0.055
Length
1224 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADSGQFVVT IGLTNINTTR QDPINVTSSR NLLPSCHVSS SSNNDDFELL WRHRKYLVLL GVLAVGVTYN AGLTPPGGSW TLNVDGHLAG DPVMHDGFSE
0101: RYKVFFYCNA AAFAASLVLI ILLLSKSVTR KRMWLHSMQL TMILDLFSLL GAYAAGSFRA LKSSIYIWVL VLAVIIYVGI HTLVSTRFIP RKLKRNLQNM
0201: INTVLIKRGF LVRQVSIPLE NVEEARKFIL MLVTFAATIT YQAGLNPPGG FWAENNHGSN KLHMALPLYN HHPATSVLKS NYLRRYNIFI TSNSTSFVTS
0301: LVIIILLLSP KLSGHGIRTK AMIVCVVVDL LCLIVAYAAG CCRDVATSFY VVFIIVIVWI SFAILAGFFV TRPVANWLQK VKSSSLWCVR KLGRALSLSF
0401: RGHRSSNAEQ DNSYASNHQP SVRSTDAPAE DNTPEPQDQP AEELPNIRED VSYEEHAPAE ERNHISDDEE AVDNSQHLSG NSQQSANIQD VASNTECQSP
0501: DVQRVAKMDE DVSSSPHPAG NCQRSEHGMG VVSNWEYGST EGKQDASMEA AKSSTEQEYD PLLSQTANSM CRVSDDQKIA SMKEHSSADD PEITVPLPKQ
0601: NISASQSNGD TSDDIVDEGF SEHVGAAGNA DRAEQNIVVE ADNPRTEIRI SDNYPTQSEN GHIDSNQVVP NQNADGIRTE KHLKKTRTCM LLLAILAVSL
0701: AYQSGLNPPG GFWSRRKDHH SAADRILEDT HHRRFIAFFY LNAIAFVASI VMITLLLNKM VRDKVTKWRA LPITMIVVLL SLTGAFALGN CREAKKTIFI
0801: SVLVCSVLAY VLIHVLIAVH IIPPGWRRQV AEMLEQSVSL FCSVPRQSGD NQTGSGTSEK ELGRRRNLLL TISILAVTVT YQAGMNPPGG VWSDDKHATG
0901: TPGNPILQDT HPKRYDVFYY SNSVSFVSSV VVTILLVNKE SCEYGIKSYA LRVCLVAGLL GLLIAYVAGS CRNIKQSIYL SAIAMGVLVS LLIQVLLSSM
1001: HDTLGKPLAK CLGFLHDLLF HAEGEQVNTL VSPEASVDVR SEASVDVRPE ASVVEEEKVR KRHKYLMLLA ILAASIAYQA GLNPPGGFWS DDKDHVPGNP
1101: VLRDINHRRY KIFFWFNSFA FMASIVVIML LLNKSIRKKA VSLGVLHLIM ILDMLALMTA FAAGSCRKLR TSVYVYALVG GVVVILLLLI IVTSAIAKYR
1201: KPREGGGTNS PRRPEPVSGA NTPA
0101: RYKVFFYCNA AAFAASLVLI ILLLSKSVTR KRMWLHSMQL TMILDLFSLL GAYAAGSFRA LKSSIYIWVL VLAVIIYVGI HTLVSTRFIP RKLKRNLQNM
0201: INTVLIKRGF LVRQVSIPLE NVEEARKFIL MLVTFAATIT YQAGLNPPGG FWAENNHGSN KLHMALPLYN HHPATSVLKS NYLRRYNIFI TSNSTSFVTS
0301: LVIIILLLSP KLSGHGIRTK AMIVCVVVDL LCLIVAYAAG CCRDVATSFY VVFIIVIVWI SFAILAGFFV TRPVANWLQK VKSSSLWCVR KLGRALSLSF
0401: RGHRSSNAEQ DNSYASNHQP SVRSTDAPAE DNTPEPQDQP AEELPNIRED VSYEEHAPAE ERNHISDDEE AVDNSQHLSG NSQQSANIQD VASNTECQSP
0501: DVQRVAKMDE DVSSSPHPAG NCQRSEHGMG VVSNWEYGST EGKQDASMEA AKSSTEQEYD PLLSQTANSM CRVSDDQKIA SMKEHSSADD PEITVPLPKQ
0601: NISASQSNGD TSDDIVDEGF SEHVGAAGNA DRAEQNIVVE ADNPRTEIRI SDNYPTQSEN GHIDSNQVVP NQNADGIRTE KHLKKTRTCM LLLAILAVSL
0701: AYQSGLNPPG GFWSRRKDHH SAADRILEDT HHRRFIAFFY LNAIAFVASI VMITLLLNKM VRDKVTKWRA LPITMIVVLL SLTGAFALGN CREAKKTIFI
0801: SVLVCSVLAY VLIHVLIAVH IIPPGWRRQV AEMLEQSVSL FCSVPRQSGD NQTGSGTSEK ELGRRRNLLL TISILAVTVT YQAGMNPPGG VWSDDKHATG
0901: TPGNPILQDT HPKRYDVFYY SNSVSFVSSV VVTILLVNKE SCEYGIKSYA LRVCLVAGLL GLLIAYVAGS CRNIKQSIYL SAIAMGVLVS LLIQVLLSSM
1001: HDTLGKPLAK CLGFLHDLLF HAEGEQVNTL VSPEASVDVR SEASVDVRPE ASVVEEEKVR KRHKYLMLLA ILAASIAYQA GLNPPGGFWS DDKDHVPGNP
1101: VLRDINHRRY KIFFWFNSFA FMASIVVIML LLNKSIRKKA VSLGVLHLIM ILDMLALMTA FAAGSCRKLR TSVYVYALVG GVVVILLLLI IVTSAIAKYR
1201: KPREGGGTNS PRRPEPVSGA NTPA
001: MEINGQEGHR YEESSSEWFV KYLKRQGDWL EKTRGNLMVT ATVIAGMSFQ VMVNPPGGVW QSDNCSFGNQ TGTAPFCKGR AGTAVLEYES SKRIAYIGMI
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
Arabidopsis Description
AT3G13950 protein [Source:UniProtKB/TrEMBL;Acc:B9DG91]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.