Factsheet for TraesCS6B01G398100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G396900.1	Wheat	plasma membrane	97.41	97.2
TraesCS6D01G346500.2	Wheat	plasma membrane	95.79	96.21
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	90.4	89.72
TraesCS6B01G397400.1	Wheat	plasma membrane	69.26	78.39
TraesCS6B01G396800.1	Wheat	plasma membrane	71.31	74.35
TraesCS6B01G398200.1	Wheat	plasma membrane	70.87	73.99
TraesCS6B01G397300.1	Wheat	plasma membrane	67.75	73.8
TraesCS6B01G397000.1	Wheat	plasma membrane	65.59	71.95
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.26	70.24
TraesCS6B01G398300.1	Wheat	plasma membrane	66.24	69.69
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	46.28	69.42
TraesCS6B01G397900.1	Wheat	cytosol, plastid	57.5	65.97
TraesCS6B01G396700.1	Wheat	plasma membrane	65.8	65.38
TraesCS7B01G048200.1	Wheat	plasma membrane	43.37	57.1
Zm00001d012387_P001	Maize	plasma membrane	32.36	56.82
Zm00001d028649_P001	Maize	plasma membrane	52.86	54.2
TraesCS7B01G124400.1	Wheat	plasma membrane	54.26	54.14
Os06t0296700-01	Rice	plasma membrane	49.3	53.7
TraesCS3B01G513700.1	Wheat	plasma membrane	39.16	47.95
TraesCS7B01G124200.1	Wheat	plasma membrane	45.74	46.85
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	30.74	46.64
Os06t0296100-00	Rice	plasma membrane	44.12	46.64
TraesCS7B01G124300.1	Wheat	plasma membrane	46.6	46.35
TraesCS2B01G139800.1	Wheat	plasma membrane	39.37	43.25
TraesCS6B01G387600.1	Wheat	plasma membrane	40.24	41.77
TraesCS2B01G054200.1	Wheat	plasma membrane	39.37	41.76
TraesCS2B01G054300.1	Wheat	plasma membrane	23.95	41.57
TraesCS5B01G345200.1	Wheat	plasma membrane	10.57	40.66
TraesCS6B01G003300.1	Wheat	plasma membrane	39.27	40.53
TraesCS4B01G387200.1	Wheat	plasma membrane	22.65	39.77
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	29.23	39.33
TraesCS2B01G065700.1	Wheat	plasma membrane	28.59	39.32
TraesCS2B01G199100.1	Wheat	plastid	5.83	38.85
TraesCS7B01G029500.1	Wheat	plasma membrane	30.1	38.43
TraesCS5B01G132500.1	Wheat	plasma membrane	37.54	38.37
TraesCS7B01G124800.1	Wheat	peroxisome	25.67	37.42
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	9.92	36.51
TraesCS3B01G595400.1	Wheat	plasma membrane	33.23	35.81
TraesCS2B01G508600.1	Wheat	plasma membrane	38.73	34.72
TraesCS7B01G124500.1	Wheat	plasma membrane	36.14	34.43
TraesCS6B01G397700.1	Wheat	plasma membrane	7.55	34.15
TraesCS7B01G124700.1	Wheat	plasma membrane	35.38	32.67
TraesCS7B01G124600.1	Wheat	plasma membrane	35.49	32.04
TraesCS2B01G023700.1	Wheat	vacuole	5.39	31.25
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	5.72	30.99
TraesCS6B01G435700.1	Wheat	plasma membrane	7.87	30.29
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	7.77	28.69
TraesCS6B01G016300.1	Wheat	plastid	4.96	28.05
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.01	27.66
TraesCS7B01G123700.1	Wheat	plasma membrane	34.2	27.47
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	33.76	26.19
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	33.98	25.74
TraesCS6B01G435400.1	Wheat	mitochondrion	6.9	25.6
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.26	24.58
TraesCS7B01G123500.1	Wheat	plasma membrane	33.33	24.37
TraesCS6B01G435100.1	Wheat	plastid	5.83	23.18
TraesCS6B01G435300.1	Wheat	plasma membrane	5.83	22.78
TraesCS6B01G436000.1	Wheat	plasma membrane	5.72	22.18
TraesCS7B01G124000.1	Wheat	plasma membrane	20.17	21.87
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	5.18	18.18
TraesCS6B01G436200.1	Wheat	cytosol	5.18	14.68

Protein Annotations

EnsemblPlants:TraesCS6B01G398100.1	EnsemblPlantsGene:TraesCS6B01G398100	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:+:673688361..673691296

Molecular Weight (calculated)

101844.0 Da

IEP (calculated)

8.720

GRAVY (calculated)

0.155

Length

927 amino acids

Sequence
(BLAST)

001: MDQPVQPWEY SLRKYLLLLA TLVVTVTYAA GFNPPGGVWQ NALGGRLAGD PIIRDTNYHR YLAFFYCNAT AFAASLVVIV LILVLAIRHD KKGKDSRWVV
101: VPLRLVMVLD LLSLMGAYGA GTCRDKISTV YSAVLVAIVF LYILVLKSMD CWDKNSDSGA GSGRGMPVSN GNTGSSSGSE TPIPNPDCGT GMISTSVPGS
201: DGMPISNGNT GSGGVMPTPN PDSNTGTIPA PILGSDPTVG EDKERPRHHK VHKKLKAEER LRKVLMLLAT FAVSITYVAG LSTPGGFWDS TEGSHHPGDA
301: VLKDNHGPRL TVFLLCNTTA FMASLLITML LIIDGKKLRK KKTVRSRMLY GCIVIALVGL VAAYIAGSCR EIDTTAYVFS LVGAVLAMAH IILLYGIYAS
401: SRSTPVQQTG EVQQTVDNVS GRKALDKARS LVLLLATLAA AITYTAGLDP PGGLWQDNSN SHMAGDPILL TTNARRYKAF FYCNSIAFVA SLVAIVLVQT
501: DILVRHHVLE AAMILDLFGL IGAYAAGSCR DVNTSIYAIA LAGAVLVYVV IHIVFFTLDH EDKKDDDQEN QLLEKRRKRL LLFAILAATI TYQAGLTPPG
601: GFLLQDDKLG HHAGDPVLLF NYPLRYKVFF YCNSVSFMLS ISLTILLVNH NLYRPAIRSN ALFVCMVVGL LCLMVAYAAG STQHLKTSIY IFLLVGAALL
701: VAAGLLLVFL LKKNDSDSAA QHTEQNQEMK ELEVRKGDKE EREEAEEKNG DKELRKKEVE ENKEERKKHE RRKYLMLLGI LVASVAYQAG LKPPGGAWQS
801: SENGYEAGDP VMHDNRRPRY LIFFYSNSFS FMASIVVIMM LLPHWLPNKK KEEWEKWSLR VMNWTILLDL FTLLVSYAAG SNRQWKTSVY VAALIFAVLV
901: YFAIHMMLSC TVCHPERHQS PQSSSEP

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.