Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G396200.1 | Wheat | cytosol, nucleus, plastid | 74.31 | 68.07 |
| TraesCS6B01G435200.1 | Wheat | cytosol, peroxisome, plasma membrane | 29.97 | 41.7 |
| TraesCS6B01G435400.1 | Wheat | mitochondrion | 30.58 | 40.0 |
| TraesCS6B01G436100.1 | Wheat | cytosol, peroxisome, plasma membrane | 32.11 | 39.77 |
| TraesCS6B01G435600.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.44 | 39.41 |
| TraesCS6B01G435700.1 | Wheat | plasma membrane | 27.83 | 37.76 |
| TraesCS6B01G435300.1 | Wheat | plasma membrane | 27.22 | 37.55 |
| TraesCS6B01G436000.1 | Wheat | plasma membrane | 24.77 | 33.89 |
| TraesCS6B01G435100.1 | Wheat | plastid | 20.49 | 28.76 |
| TraesCS2B01G199100.1 | Wheat | plastid | 6.73 | 15.83 |
| Os04t0168400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 8.56 | 15.22 |
| TraesCS2B01G030400.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 9.79 | 12.7 |
| TraesCS6B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 13.46 | 11.8 |
| TraesCS2B01G023700.1 | Wheat | vacuole | 5.2 | 10.62 |
| TraesCS4B01G387200.1 | Wheat | plasma membrane | 17.13 | 10.61 |
| TraesCS1B01G041800.1 | Wheat | extracellular, plasma membrane, vacuole | 5.5 | 10.53 |
| TraesCS2B01G199200.1 | Wheat | cytosol, peroxisome, vacuole | 7.95 | 10.36 |
| TraesCS5B01G345200.1 | Wheat | plasma membrane | 7.03 | 9.54 |
| TraesCS6B01G397100.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 16.51 | 8.74 |
| TraesCS7B01G124800.1 | Wheat | peroxisome | 16.21 | 8.33 |
| TraesCS6B01G016300.1 | Wheat | plastid | 3.98 | 7.93 |
| TraesCS2B01G030300.1 | Wheat | cytosol, peroxisome, plasma membrane | 15.9 | 7.55 |
| TraesCS2B01G065700.1 | Wheat | plasma membrane | 14.37 | 6.97 |
| TraesCS6B01G397000.1 | Wheat | plasma membrane | 17.13 | 6.63 |
| TraesCS6B01G397300.1 | Wheat | plasma membrane | 16.82 | 6.46 |
| TraesCS6B01G397900.1 | Wheat | cytosol, plastid | 15.9 | 6.44 |
| TraesCS6B01G397700.1 | Wheat | plasma membrane | 3.98 | 6.34 |
| TraesCS2B01G139800.1 | Wheat | plasma membrane | 16.21 | 6.28 |
| TraesCS5B01G132500.1 | Wheat | plasma membrane | 17.13 | 6.17 |
| TraesCS2B01G054200.1 | Wheat | plasma membrane | 16.21 | 6.06 |
| TraesCS6B01G398300.1 | Wheat | plasma membrane | 16.21 | 6.02 |
| TraesCS6B01G398200.1 | Wheat | plasma membrane | 16.21 | 5.97 |
| TraesCS7B01G124000.1 | Wheat | plasma membrane | 15.6 | 5.96 |
| TraesCS3B01G595400.1 | Wheat | plasma membrane | 15.6 | 5.93 |
| TraesCS6B01G396800.1 | Wheat | plasma membrane | 15.9 | 5.85 |
| TraesCS7B01G124300.1 | Wheat | plasma membrane | 16.51 | 5.79 |
| TraesCS6B01G396700.1 | Wheat | plasma membrane | 16.51 | 5.79 |
| TraesCS3B01G513700.1 | Wheat | plasma membrane | 13.15 | 5.68 |
| TraesCS7B01G124500.1 | Wheat | plasma membrane | 16.82 | 5.65 |
| TraesCS6B01G387600.1 | Wheat | plasma membrane | 14.98 | 5.49 |
| TraesCS7B01G124200.1 | Wheat | plasma membrane | 14.98 | 5.41 |
| TraesCS6B01G396900.1 | Wheat | plasma membrane | 15.29 | 5.38 |
| TraesCS7B01G124700.1 | Wheat | plasma membrane | 16.51 | 5.38 |
| TraesCS7B01G124600.1 | Wheat | plasma membrane | 16.82 | 5.36 |
| TraesCS6B01G398100.1 | Wheat | plasma membrane | 14.68 | 5.18 |
| TraesCS2B01G508600.1 | Wheat | plasma membrane | 16.21 | 5.13 |
| TraesCS7B01G048200.1 | Wheat | plasma membrane | 11.01 | 5.11 |
| TraesCS7B01G124400.1 | Wheat | plasma membrane | 14.37 | 5.06 |
| TraesCS6B01G003300.1 | Wheat | plasma membrane | 13.76 | 5.01 |
| TraesCS7B01G029500.1 | Wheat | plasma membrane | 11.01 | 4.96 |
| TraesCS6B01G397400.1 | Wheat | plasma membrane | 11.93 | 4.76 |
| TraesCS7B01G123700.1 | Wheat | plasma membrane | 15.6 | 4.42 |
| TraesCS7B01G123900.1 | Wheat | nucleus, peroxisome, plasma membrane | 15.9 | 4.35 |
| TraesCS7B01G123500.1 | Wheat | plasma membrane | 16.21 | 4.18 |
| TraesCS7B01G123600.1 | Wheat | plasma membrane, plastid | 14.37 | 3.84 |
| TraesCS2B01G054300.1 | Wheat | plasma membrane | 6.12 | 3.75 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G436200.1 | EnsemblPlantsGene:TraesCS6B01G436200 | InterPro:PGG_dom | ncoils:Coil | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF45 |
| PFAM:PF13962 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:704016625..704018692
Molecular Weight (calculated)
34927.9 Da
IEP (calculated)
4.009
GRAVY (calculated)
-0.283
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKPEHLTGY GLMDPAENNM SKEADSVAIS IEEDVLLGDS SRPEEADRVA MPSGEGVLLK DSLQSQLQEI SVNHESMLKE ADIVALSIGE EVHGDSSLPE
101: EADSREIPSG EGILLGDSLQ SQQQEINVNH ENTEEEADTV AIQLGLRRRL GGSSLLEEAD IVEISIGENV LLGDSTLPGE AEGVPMLSGE GVLPGDSSQT
201: QQQEITIDHG PHMSIDELLK VIKGANGMPV LFVPSSDGRL AAVAVDGLQN LVPANRDNNV SGENKNQDFR AWLLLLASLV ATVTYTAGLT PPGGFWAADD
301: KANGYVAGTS VMRDKFNRRI MFCELGD
101: EADSREIPSG EGILLGDSLQ SQQQEINVNH ENTEEEADTV AIQLGLRRRL GGSSLLEEAD IVEISIGENV LLGDSTLPGE AEGVPMLSGE GVLPGDSSQT
201: QQQEITIDHG PHMSIDELLK VIKGANGMPV LFVPSSDGRL AAVAVDGLQN LVPANRDNNV SGENKNQDFR AWLLLLASLV ATVTYTAGLT PPGGFWAADD
301: KANGYVAGTS VMRDKFNRRI MFCELGD
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.