Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G387200.1 | Wheat | plasma membrane | 39.42 | 64.2 |
| TraesCS4A01G395800.1 | Wheat | plasma membrane | 34.53 | 59.52 |
| Os06t0293000-00 | Rice | vacuole | 18.49 | 55.59 |
| TraesCS7B01G029500.1 | Wheat | plasma membrane | 44.3 | 52.48 |
| TraesCS2B01G508600.1 | Wheat | plasma membrane | 62.44 | 51.93 |
| Os06t0293100-00 | Rice | cytosol | 24.65 | 43.18 |
| TraesCS6B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 16.28 | 37.53 |
| TraesCS3B01G513700.1 | Wheat | plasma membrane | 32.79 | 37.25 |
| TraesCS6B01G397100.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 26.51 | 36.89 |
| TraesCS7B01G124800.1 | Wheat | peroxisome | 26.98 | 36.48 |
| TraesCS5B01G132500.1 | Wheat | plasma membrane | 38.26 | 36.27 |
| TraesCS6B01G397000.1 | Wheat | plasma membrane | 35.58 | 36.21 |
| TraesCS7B01G124300.1 | Wheat | plasma membrane | 38.84 | 35.84 |
| TraesCS7B01G124200.1 | Wheat | plasma membrane | 37.21 | 35.36 |
| TraesCS6B01G397300.1 | Wheat | plasma membrane | 34.19 | 34.55 |
| TraesCS2B01G199100.1 | Wheat | plastid | 5.58 | 34.53 |
| TraesCS5B01G345200.1 | Wheat | plasma membrane | 9.65 | 34.44 |
| TraesCS7B01G124500.1 | Wheat | plasma membrane | 38.6 | 34.12 |
| TraesCS6B01G396800.1 | Wheat | plasma membrane | 35.0 | 33.86 |
| TraesCS6B01G398200.1 | Wheat | plasma membrane | 34.77 | 33.67 |
| TraesCS7B01G124400.1 | Wheat | plasma membrane | 36.16 | 33.48 |
| TraesCS6B01G387600.1 | Wheat | plasma membrane | 34.65 | 33.37 |
| TraesCS2B01G054300.1 | Wheat | plasma membrane | 20.7 | 33.33 |
| TraesCS6B01G398100.1 | Wheat | plasma membrane | 35.81 | 33.23 |
| TraesCS6B01G397900.1 | Wheat | cytosol, plastid | 31.16 | 33.17 |
| TraesCS2B01G139800.1 | Wheat | plasma membrane | 32.44 | 33.06 |
| TraesCS6B01G396900.1 | Wheat | plasma membrane | 35.7 | 33.05 |
| TraesCS2B01G030400.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 9.65 | 32.94 |
| TraesCS6B01G398300.1 | Wheat | plasma membrane | 33.72 | 32.92 |
| TraesCS2B01G054200.1 | Wheat | plasma membrane | 33.37 | 32.84 |
| TraesCS7B01G124700.1 | Wheat | plasma membrane | 38.26 | 32.77 |
| TraesCS1B01G041800.1 | Wheat | extracellular, plasma membrane, vacuole | 6.51 | 32.75 |
| TraesCS6B01G396700.1 | Wheat | plasma membrane | 34.65 | 31.94 |
| TraesCS7B01G048200.1 | Wheat | plasma membrane | 26.05 | 31.82 |
| TraesCS7B01G124600.1 | Wheat | plasma membrane | 37.91 | 31.74 |
| TraesCS2B01G023700.1 | Wheat | vacuole | 5.81 | 31.25 |
| TraesCS6B01G397400.1 | Wheat | plasma membrane | 29.07 | 30.52 |
| TraesCS6B01G003300.1 | Wheat | plasma membrane | 31.86 | 30.51 |
| TraesCS6B01G016300.1 | Wheat | plastid | 5.7 | 29.88 |
| TraesCS2B01G065700.1 | Wheat | plasma membrane | 23.26 | 29.67 |
| TraesCS2B01G030300.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.56 | 28.16 |
| TraesCS6B01G435200.1 | Wheat | cytosol, peroxisome, plasma membrane | 7.56 | 27.66 |
| TraesCS2B01G199200.1 | Wheat | cytosol, peroxisome, vacuole | 7.79 | 26.69 |
| TraesCS6B01G435700.1 | Wheat | plasma membrane | 7.33 | 26.14 |
| TraesCS6B01G397700.1 | Wheat | plasma membrane | 6.16 | 25.85 |
| TraesCS6B01G435100.1 | Wheat | plastid | 6.98 | 25.75 |
| TraesCS6B01G435600.1 | Wheat | cytosol, peroxisome, plasma membrane | 6.98 | 25.42 |
| TraesCS6B01G435400.1 | Wheat | mitochondrion | 7.33 | 25.2 |
| TraesCS6B01G435300.1 | Wheat | plasma membrane | 6.86 | 24.89 |
| TraesCS7B01G123900.1 | Wheat | nucleus, peroxisome, plasma membrane | 34.53 | 24.85 |
| TraesCS7B01G123700.1 | Wheat | plasma membrane | 32.44 | 24.18 |
| TraesCS7B01G123500.1 | Wheat | plasma membrane | 34.88 | 23.66 |
| TraesCS7B01G123600.1 | Wheat | plasma membrane, plastid | 32.91 | 23.12 |
| TraesCS6B01G436000.1 | Wheat | plasma membrane | 6.28 | 22.59 |
| TraesCS7B01G124000.1 | Wheat | plasma membrane | 20.81 | 20.94 |
| TraesCS6B01G436100.1 | Wheat | cytosol, peroxisome, plasma membrane | 5.58 | 18.18 |
| TraesCS6B01G436200.1 | Wheat | cytosol | 5.93 | 15.6 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G595400.1 | EnsemblPlantsGene:TraesCS3B01G595400 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF15 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:818314312..818317058
Molecular Weight (calculated)
94029.4 Da
IEP (calculated)
6.505
GRAVY (calculated)
0.279
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGAIEDME FLWRWRKYLL LFAMLVASVT YGAGLNPPGG VRSEDGGNAS EHRTDGVGVD PPLPPPPPAV YPFLVGDPLL ASTYSRQYTA FFYCNAAAFV
101: LSLVIIMLLL DRRLSQNRVG LTVLRSAMLL DLLALMAAFA AGSCCDVVAS IYVSGLFALV FAYVALHLCV STSRADSHLE EQRRRYPLLL ATFATPLTYS
201: AGLTPPGGFW SKTVAGHHTG DPLLHDGSYK IGYQAFFYAN AISFVASLAM AMMAMSPTLS GRLVRSYALP VCILVELLGL MAAYATGSCR WPTSTVYVFS
301: LGGAVLLYIV LQMVVATCAM ETLKQLRGTV CRILSCADRP EEEEEGEGEE EEEEEEEEGE GEGEGTSRCS IVDGYNVEAE AKVDESRALL LLLATLAATV
401: TYQAGLSPPG GVWPDNNDQG HPHHIAGNPV LLDMHPKRYK AFYYCNTWAF VASLVIIIIL QSKELSSAAN IRRAALKTAM VLELFGLMGA YVAGGCRDTT
501: TSIYVFVVAI AMFVYSIAMV MVYTAHGQSR LMKWVHRMSD KLGGVFHLHS RYGSESGAQD DNRLERKRQF LLQLSSLAAT VTYQIGLNPP GGFWTESDRD
601: RSVTAGDPVL LDHYVLGSCR QLRTSIYVLA LVAAVVAFLV LHFILLVSAG HWSLLQWLPQ QLKRLFEPLP VLQLANENQR NVLSLSGKQQ HRKLMRLMVL
701: GVLAATVTYQ SGLTPPGGTW GDDNDTGSSW SPSAYPLIVA GNPILMDTNP ERYQAFFYCN STSFMASIVV IMLVLQHAVM RRGMPLWVMQ TAVVLDLLGL
801: LGAYTAGSCR DWETSACVMG LIAAVVVFIT IYAVLSKKKI ISWKCLGENH SDDVQFSRNV
101: LSLVIIMLLL DRRLSQNRVG LTVLRSAMLL DLLALMAAFA AGSCCDVVAS IYVSGLFALV FAYVALHLCV STSRADSHLE EQRRRYPLLL ATFATPLTYS
201: AGLTPPGGFW SKTVAGHHTG DPLLHDGSYK IGYQAFFYAN AISFVASLAM AMMAMSPTLS GRLVRSYALP VCILVELLGL MAAYATGSCR WPTSTVYVFS
301: LGGAVLLYIV LQMVVATCAM ETLKQLRGTV CRILSCADRP EEEEEGEGEE EEEEEEEEGE GEGEGTSRCS IVDGYNVEAE AKVDESRALL LLLATLAATV
401: TYQAGLSPPG GVWPDNNDQG HPHHIAGNPV LLDMHPKRYK AFYYCNTWAF VASLVIIIIL QSKELSSAAN IRRAALKTAM VLELFGLMGA YVAGGCRDTT
501: TSIYVFVVAI AMFVYSIAMV MVYTAHGQSR LMKWVHRMSD KLGGVFHLHS RYGSESGAQD DNRLERKRQF LLQLSSLAAT VTYQIGLNPP GGFWTESDRD
601: RSVTAGDPVL LDHYVLGSCR QLRTSIYVLA LVAAVVAFLV LHFILLVSAG HWSLLQWLPQ QLKRLFEPLP VLQLANENQR NVLSLSGKQQ HRKLMRLMVL
701: GVLAATVTYQ SGLTPPGGTW GDDNDTGSSW SPSAYPLIVA GNPILMDTNP ERYQAFFYCN STSFMASIVV IMLVLQHAVM RRGMPLWVMQ TAVVLDLLGL
801: LGAYTAGSCR DWETSACVMG LIAAVVVFIT IYAVLSKKKI ISWKCLGENH SDDVQFSRNV
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.