Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G030300.1 | Wheat | cytosol, peroxisome, plasma membrane | 59.05 | 57.76 |
| TraesCS2A01G041700.1 | Wheat | plasma membrane | 59.05 | 45.07 |
| Zm00001d045859_P001 | Maize | plastid | 39.17 | 44.82 |
| TraesCS2B01G054200.1 | Wheat | plasma membrane | 57.86 | 44.62 |
| HORVU2Hr1G006360.2 | Barley | plasma membrane, vacuole | 58.9 | 44.06 |
| TraesCS2D01G040400.1 | Wheat | plasma membrane | 59.05 | 43.98 |
| TraesCS6B01G397100.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 37.24 | 40.61 |
| KXG35244 | Sorghum | plasma membrane | 42.73 | 39.02 |
| TraesCS2B01G054300.1 | Wheat | plasma membrane | 30.27 | 38.2 |
| TraesCS6B01G397800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 19.58 | 35.39 |
| TraesCS7B01G124300.1 | Wheat | plasma membrane | 48.81 | 35.3 |
| TraesCS3B01G513700.1 | Wheat | plasma membrane | 39.47 | 35.14 |
| TraesCS5B01G345200.1 | Wheat | plasma membrane | 11.87 | 33.2 |
| Zm00001d045793_P001 | Maize | plasma membrane | 41.25 | 32.59 |
| TraesCS6B01G397000.1 | Wheat | plasma membrane | 39.91 | 31.83 |
| TraesCS6B01G387600.1 | Wheat | plasma membrane | 40.8 | 30.8 |
| TraesCS6B01G397300.1 | Wheat | plasma membrane | 38.87 | 30.79 |
| TraesCS6B01G396800.1 | Wheat | plasma membrane | 40.5 | 30.71 |
| TraesCS6B01G398200.1 | Wheat | plasma membrane | 39.91 | 30.29 |
| TraesCS2B01G199100.1 | Wheat | plastid | 6.23 | 30.22 |
| TraesCS4B01G387200.1 | Wheat | plasma membrane | 23.59 | 30.11 |
| TraesCS7B01G124200.1 | Wheat | plasma membrane | 40.21 | 29.94 |
| TraesCS6B01G398300.1 | Wheat | plasma membrane | 38.72 | 29.63 |
| TraesCS6B01G397900.1 | Wheat | cytosol, plastid | 34.87 | 29.08 |
| TraesCS7B01G124400.1 | Wheat | plasma membrane | 39.76 | 28.85 |
| TraesCS6B01G398100.1 | Wheat | plasma membrane | 39.32 | 28.59 |
| TraesCS7B01G048200.1 | Wheat | plasma membrane | 29.67 | 28.41 |
| TraesCS6B01G396900.1 | Wheat | plasma membrane | 38.87 | 28.2 |
| TraesCS6B01G396700.1 | Wheat | plasma membrane | 38.72 | 27.97 |
| TraesCS6B01G397400.1 | Wheat | plasma membrane | 33.83 | 27.84 |
| TraesCS2B01G030400.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 10.39 | 27.78 |
| TraesCS7B01G124800.1 | Wheat | peroxisome | 25.67 | 27.2 |
| TraesCS6B01G003300.1 | Wheat | plasma membrane | 35.91 | 26.95 |
| TraesCS7B01G029500.1 | Wheat | plasma membrane | 28.64 | 26.58 |
| TraesCS2B01G139800.1 | Wheat | plasma membrane | 32.49 | 25.95 |
| TraesCS2B01G023700.1 | Wheat | vacuole | 6.08 | 25.62 |
| TraesCS5B01G132500.1 | Wheat | plasma membrane | 33.09 | 24.59 |
| TraesCS1B01G041800.1 | Wheat | extracellular, plasma membrane, vacuole | 5.93 | 23.39 |
| TraesCS2B01G508600.1 | Wheat | plasma membrane | 35.76 | 23.31 |
| TraesCS3B01G595400.1 | Wheat | plasma membrane | 29.67 | 23.26 |
| TraesCS6B01G397700.1 | Wheat | plasma membrane | 6.97 | 22.93 |
| TraesCS2B01G199200.1 | Wheat | cytosol, peroxisome, vacuole | 8.46 | 22.71 |
| TraesCS7B01G124500.1 | Wheat | plasma membrane | 32.05 | 22.2 |
| TraesCS6B01G016300.1 | Wheat | plastid | 5.34 | 21.95 |
| TraesCS6B01G435700.1 | Wheat | plasma membrane | 7.72 | 21.58 |
| TraesCS7B01G124700.1 | Wheat | plasma membrane | 31.6 | 21.22 |
| TraesCS7B01G124600.1 | Wheat | plasma membrane | 31.75 | 20.84 |
| TraesCS6B01G435200.1 | Wheat | cytosol, peroxisome, plasma membrane | 6.97 | 20.0 |
| TraesCS6B01G435400.1 | Wheat | mitochondrion | 7.27 | 19.6 |
| TraesCS6B01G435600.1 | Wheat | cytosol, peroxisome, plasma membrane | 6.68 | 19.07 |
| TraesCS6B01G435300.1 | Wheat | plasma membrane | 6.68 | 18.99 |
| TraesCS6B01G436100.1 | Wheat | cytosol, peroxisome, plasma membrane | 6.97 | 17.8 |
| TraesCS7B01G123700.1 | Wheat | plasma membrane | 30.27 | 17.68 |
| TraesCS7B01G123900.1 | Wheat | nucleus, peroxisome, plasma membrane | 30.86 | 17.41 |
| TraesCS6B01G435100.1 | Wheat | plastid | 5.79 | 16.74 |
| TraesCS6B01G436000.1 | Wheat | plasma membrane | 5.93 | 16.74 |
| TraesCS7B01G124000.1 | Wheat | plasma membrane | 21.07 | 16.61 |
| TraesCS7B01G123600.1 | Wheat | plasma membrane, plastid | 29.08 | 16.01 |
| TraesCS7B01G123500.1 | Wheat | plasma membrane | 29.97 | 15.93 |
| TraesCS6B01G436200.1 | Wheat | cytosol | 6.97 | 14.37 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G065700.1 | EnsemblPlantsGene:TraesCS2B01G065700 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF45 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:32911868..32914119
Molecular Weight (calculated)
74669.8 Da
IEP (calculated)
9.875
GRAVY (calculated)
0.337
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTSNKDSDS KLYELNEQLL LLASLVTTVT YLSGLNLLGG NWQQMEDGHV AGNPILRYTD ISRYRILYSF NATAFASSVM VCLILVMLRR NRKVWTMVLP
101: VVMVVDLLSV IGSFAAGTCR DAFTTIFASG LAFAVLAYIA YAFIPCYVRS WNRGRDNTPI PINTNKGYKE KKKVEVLILL ATFTFTISYA TGLNPPGGFW
201: SSTQHEKEDG RLLHLAGNPI MEDTRRRRYR AFFVCNTVVL LASLLVILLL LANKVSRIIS ARVVRIYGFI AVALLGLMGA YATGSSRETE NTVMVIVSLS
301: TVIPAWVGLQ LALNYVFHWK PIRNVRDNFS QWSKKSSPAG DSAVASTVFK NNCYLAMVLA GFAVCITYQA GMDPPGGLWQ DNLDGHEIGR PVLQTTHHAR
401: YQVFFYSNSA AFVTSLVLVM MVQSKFLLTL HTLEGCMVLD LICLVTAYAA GSTRDAKRSI YVVIVIGLIL IYIAVHVCAV GLKENVVAEP VPVPAATTSA
501: PAFARRVAGE RSSNQQLDDN GQVLRLIAIL AAALTYQAGL SPPGGFWPAD DEQLGHRAGY PVLLDNYPRR YSAFFYCNAV SFMASVAVIL LLVNQKLYRR
601: VIRGYRLHAC MALGMYALMG AYASGSSRHL KTSIYMLTMV MAVVLLPVCI FSYNRFVRYR IKHQVEPTTR PRRR
101: VVMVVDLLSV IGSFAAGTCR DAFTTIFASG LAFAVLAYIA YAFIPCYVRS WNRGRDNTPI PINTNKGYKE KKKVEVLILL ATFTFTISYA TGLNPPGGFW
201: SSTQHEKEDG RLLHLAGNPI MEDTRRRRYR AFFVCNTVVL LASLLVILLL LANKVSRIIS ARVVRIYGFI AVALLGLMGA YATGSSRETE NTVMVIVSLS
301: TVIPAWVGLQ LALNYVFHWK PIRNVRDNFS QWSKKSSPAG DSAVASTVFK NNCYLAMVLA GFAVCITYQA GMDPPGGLWQ DNLDGHEIGR PVLQTTHHAR
401: YQVFFYSNSA AFVTSLVLVM MVQSKFLLTL HTLEGCMVLD LICLVTAYAA GSTRDAKRSI YVVIVIGLIL IYIAVHVCAV GLKENVVAEP VPVPAATTSA
501: PAFARRVAGE RSSNQQLDDN GQVLRLIAIL AAALTYQAGL SPPGGFWPAD DEQLGHRAGY PVLLDNYPRR YSAFFYCNAV SFMASVAVIL LLVNQKLYRR
601: VIRGYRLHAC MALGMYALMG AYASGSSRHL KTSIYMLTMV MAVVLLPVCI FSYNRFVRYR IKHQVEPTTR PRRR
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.