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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d045859_P001 Maize plastid 45.8 57.39
HORVU7Hr1G044080.2 Barley golgi, plasma membrane 33.33 55.78
TraesCS3D01G466700.1 Wheat plasma membrane 57.99 48.86
TraesCS7D01G218700.1 Wheat plasma membrane 61.65 48.77
TraesCS7B01G124300.1 Wheat plasma membrane 61.52 48.71
TraesCS3A01G471000.1 Wheat plasma membrane 57.32 48.34
TraesCS3B01G513700.1 Wheat plasma membrane 48.24 47.03
Zm00001d045793_P001 Maize plasma membrane 52.03 45.02
TraesCS2B01G030300.1 Wheat cytosol, peroxisome, plasma membrane 41.6 44.56
TraesCS2B01G065700.1 Wheat plasma membrane 39.02 42.73
TraesCS2A01G041700.1 Wheat plasma membrane 50.0 41.79
TraesCS2B01G054200.1 Wheat plasma membrane 48.37 40.85
TraesCS2D01G040400.1 Wheat plasma membrane 49.59 40.44
TraesCS7D01G035200.1 Wheat plasma membrane 50.81 39.47
TraesCS7A01G040300.1 Wheat plasma membrane 50.81 39.47
TraesCS7D01G034700.1 Wheat plasma membrane 49.73 38.31
TraesCS7D01G034500.1 Wheat plasma membrane 49.05 38.07
TraesCS2A01G041800.1 Wheat plasma membrane 47.97 37.86
TraesCS2B01G054300.1 Wheat plasma membrane 27.37 37.83
TraesCS4A01G449800.1 Wheat peroxisome 50.68 37.66
TraesCS7D01G034600.1 Wheat plasma membrane 50.41 37.27
TraesCS4A01G450100.2 Wheat mitochondrion, plasma membrane 49.46 37.09
TraesCS7A01G038500.1 Wheat plasma membrane 50.14 36.31
TraesCS4A01G449900.1 Wheat plasma membrane 50.0 36.18
TraesCS4A01G450200.1 Wheat plasma membrane 50.14 36.13
OQU84100 Sorghum plasma membrane 45.12 36.08
TraesCS7A01G038400.1 Wheat plasma membrane 49.73 35.87
OQU83898 Sorghum plasma membrane 46.21 35.78
EES07991 Sorghum plasma membrane 45.53 35.29
OQU85243 Sorghum plasma membrane 40.11 34.86
KXG33698 Sorghum plasma membrane 46.21 34.73
OQU92813 Sorghum endoplasmic reticulum, plasma membrane 38.21 34.39
TraesCS4A01G450000.1 Wheat plasma membrane 35.37 34.3
KXG27752 Sorghum plasma membrane 44.04 33.78
TraesCS4A01G448200.1 Wheat plasma membrane 41.73 33.59
OQU76268 Sorghum plasma membrane 13.28 33.56
KXG19807 Sorghum plasma membrane 9.49 33.02
TraesCS2D01G040500.1 Wheat plasma membrane 20.6 32.2
OQU82858 Sorghum cytosol, peroxisome, plasma membrane 38.21 32.05
EES09243 Sorghum plasma membrane 32.79 30.99
OQU76269 Sorghum plasma membrane 33.6 29.88
KXG19831 Sorghum plasma membrane 36.59 29.48
KXG19808 Sorghum cytosol, peroxisome, plasma membrane 10.43 26.01
EER89616 Sorghum plasma membrane 9.76 25.62
EER89615 Sorghum cytosol, peroxisome, plasma membrane 9.21 25.19
EER89631 Sorghum plasma membrane 35.23 21.05
OQU76264 Sorghum plasma membrane 34.55 21.04
TraesCSU01G183600.1 Wheat extracellular, plasma membrane, vacuole 2.85 13.64
Protein Annotations
EnsemblPlants:KXG35244EnsemblPlantsGene:SORBI_3002G149200GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:PGG_dom
PANTHER:PTHR24177PANTHER:PTHR24177:SF45PFAM:PF13962ProteinID:KXG35244ProteinID:KXG35244.1SEG:seg
TMHMM:TMhelixUniParc:UPI00081AB743UniProt:A0A1B6QBG4MapMan:35.2::
Description
hypothetical protein
Coordinates
chr2:+:41365593..41368396
Molecular Weight (calculated)
80898.8 Da
IEP (calculated)
9.196
GRAVY (calculated)
0.268
Length
738 amino acids
Sequence
(BLAST)
001: MAREDQAASQ SEGQKNEPQS TTEYQLKKYL LLLATLVATV TYAAGLNLPG GVWQDTLQGH TVGDPILPDT QHRRYLVFYY CNATAFTASL VVCLLVLALD
101: KKSKGPVAVL LRLVMLLDLL ALMGAYAAGS CRDRFTTIYS LLLMSSVFAY IMPALVAFAI SKLAANSNGN NNTSSSSSAD SRREEMHETL MLLTTFAVAV
201: TYVAGLNPPG GFWGNTVHGG VALPQPHRVS HPVLKDHHPR RYQAFFVCNT TAFVVSLIII MLLMDKKLTK EVSTRFVTLY VLVVVALLGL VGAYVAGSSR
301: ERDNTAYVIG LGIAVLACIL LQLSLKIEMR QAKAIRALFD AAKERIQRLF VDDHSRRGTQ DAQEETRTTS LVTAKSRELV MLLATLAASI TYQAGLDPPG
401: GLWQDDRHGH KTGESVLLTT HPGRYMVFFY SNSAAFVASL VVIMMVQSTF LLQRHTLEAA LILDLFGLIC AYAAGSCRDV STSVYVVALA GVVLVYVVIH
501: IIFFTLDQKA DNDKPEEMNN KREVLLLLAI LVATLTYQAG LTPPGGFWPA TFADKSGRHH AGYPVLHDTY PKRYNAFFYC NAASFMTSVA LILLLVNPAL
601: YKVGIRCYAL YVCMVAGMFG LVGAYTAGSS RRLRTSIYVL VLAIGLFVFV TVQVFIYWRR WKCRRREVDV QICGDRSRDH HQQRPYTSTS GEGGGTGTSS
701: TDDKQKSLRE YLMLLGILAA SVTYQTGLKP PGGLCVGA
Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.