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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 3
  • plasma membrane 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037386_P001 Maize plasma membrane 81.46 81.0
Zm00001d029728_P001 Maize endoplasmic reticulum, golgi, plasma membrane 24.86 73.44
TraesCS7B01G123900.1 Wheat nucleus, peroxisome, plasma membrane 55.47 57.32
TraesCS7D01G218400.1 Wheat nucleus, peroxisome, plasma membrane 54.74 56.76
Os06t0292400-00 Rice plasma membrane 55.06 55.83
HORVU7Hr1G044020.6 Barley cytosol, peroxisome 14.17 55.2
TraesCS7A01G216900.1 Wheat plasma membrane 35.47 50.99
OQU76264 Sorghum plasma membrane 49.96 50.91
EES09243 Sorghum plasma membrane 24.78 39.18
OQU76269 Sorghum plasma membrane 25.59 38.07
OQU82858 Sorghum cytosol, peroxisome, plasma membrane 27.04 37.95
OQU76268 Sorghum plasma membrane 8.83 37.33
KXG19831 Sorghum plasma membrane 26.32 35.48
KXG35244 Sorghum plasma membrane 21.05 35.23
OQU85243 Sorghum plasma membrane 23.81 34.63
OQU92813 Sorghum endoplasmic reticulum, plasma membrane 22.75 34.27
OQU84100 Sorghum plasma membrane 25.51 34.13
KXG19807 Sorghum plasma membrane 5.75 33.49
EES07991 Sorghum plasma membrane 25.43 32.98
KXG33698 Sorghum plasma membrane 26.07 32.79
KXG27752 Sorghum plasma membrane 25.1 32.22
OQU83898 Sorghum plasma membrane 23.81 30.85
EER89615 Sorghum cytosol, peroxisome, plasma membrane 6.32 28.89
KXG19808 Sorghum cytosol, peroxisome, plasma membrane 6.8 28.38
EER89616 Sorghum plasma membrane 6.15 27.05
Protein Annotations
MapMan:35.2UniProt:C5Z904ncoils:CoilEnsemblPlants:EER89631ProteinID:EER89631ProteinID:EER89631.1
GO:GO:0005575GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021ProteinID:KXG19827.1PFAM:PF13962InterPro:PGG_domPANTHER:PTHR24177PANTHER:PTHR24177:SF43
EnsemblPlantsGene:SORBI_3010G122400unigene:Sbi.21115TMHMM:TMhelixUniParc:UPI0001A89AC4RefSeq:XP_002438264.1SEG:seg
Description
hypothetical protein
Coordinates
chr10:-:14189890..14199958
Molecular Weight (calculated)
136684.0 Da
IEP (calculated)
7.393
GRAVY (calculated)
-0.014
Length
1235 amino acids
Sequence
(BLAST)
0001: MASTAAAPEA SNNHNEDSTT HGGSTGEESI DSSSTRKLLA PSHESDFELL WRLRKYLLLL GILAVSVTYN AGITPPGGFW LNNTKHGRSG HDAGDPVLRA
0101: WFFPRYEVFF YCNATAFAAS LVLIILLLSK NVTRQKLWLR SMQLTMILDL FSLMGAYAAG SYRAVKSSIY IWVLVFSVFI YIMIHILVFI RVVRKFVSEK
0201: RFVLKWLKET AQSVQDWILS RCGFQMTRRN NYHEKDLEEA RKFILMLVTF AATVTYQAGL SPPGGFWAEN GDNKIPATSM LRSKNLARYN TFVICNSTSF
0301: VASLVTIILL LSPELSGHGI RSKAVIVCVV IDILSLVGAY AAGSCRSVAT SVCAILIAVV VWICFALLAG IFVNRSVAGW FGKIKPDIMW YMDKFGRVVS
0401: LNFGSKRSRN PEGENSISSN QQTADCIKDA AEPETARVSE YQLQYHQQDP NIKEGESPGE QQSTGKQQPT NTGVVSSSDH AFVNDKQAEN GSNVTCNLEG
0501: QSTDANSVAN EVMSETETEN MQDAKMGEQS SLVDDLKSPI TVAGMSNHEH QLVENHRVQS MIRQSFSTDD QESTAMECLS DIASNNHDGG TNSVKEEEKT
0601: SEETLEEIEI ESSETINISR PIENGDIGMH EVAPRQNASN VNAGANPTDE HLKKSRTYLL LLAILAVSLT YQSGLNPPGG FWSQRENNNS TGVSMPKNTH
0701: HRPYHLPGDP ILEDTHHRRY IAFFYLNAIA FVASLVMIIM LLNKRMSNKV IKRYALQITM IVDLLALTGS YVMGSCRDSK SSIYIWLLVC LVLAYVVLHV
0801: LIAIHVIPEG CKKFVAHEIE NLSCRYIWTN PLNGNNQRSD ANGNDCELGL SQRGDADDKN WEQRRNLLLM LAILAATVTY QAGMNPPGGV WSDDEAVSGK
0901: PGDPILQHNN FKRYDVFYYS NSLSFVASVV ITILLVNKES CEHGIKSYAL RVCLVVGLVS LLIAYSAGSC RKARESIYLI IIAVAVLISL VIQVILLSST
1001: QDSLRGPTGQ FIERLLKLLF GKDEAWHGAT SQQKESSDSP EKKVRKRHKY LMLLAVLAAS ITYQAGLNPP GGFWSDDNEG HVEGNPGLKP PGKLWSDNKG
1101: HLAGNPVLLD INPQRYEIFF CFNSISFMAS IVVVMYLLNK SARKKDVPLE VLHLIMILDL LALMTAFAAG SCRKFRTSVY VYALVLGVVV YLVIVVLLSS
1201: GIAKCLRPME RNKVSSQRSP SHASTTSTLI LEDQV
Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.