Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0292100-00 | Rice | plasma membrane | 48.51 | 63.23 |
| TraesCS7A01G216500.1 | Wheat | plasma membrane | 26.49 | 60.0 |
| TraesCS7A01G216700.1 | Wheat | plasma membrane | 52.39 | 55.22 |
| TraesCS7B01G123700.1 | Wheat | plasma membrane | 52.23 | 54.85 |
| TraesCS7D01G218300.1 | Wheat | plasma membrane | 50.58 | 54.63 |
| TraesCS7A01G217100.1 | Wheat | plasma membrane | 51.32 | 53.39 |
| HORVU7Hr1G043880.1 | Barley | plasma membrane | 53.47 | 52.94 |
| TraesCS7D01G218200.1 | Wheat | plasma membrane, plastid | 47.44 | 51.94 |
| TraesCS7B01G123600.1 | Wheat | plasma membrane, plastid | 51.98 | 51.47 |
| EER89631 | Sorghum | plasma membrane | 50.91 | 49.96 |
| TraesCS7B01G124000.1 | Wheat | plasma membrane | 34.08 | 48.3 |
| HORVU7Hr1G043950.7 | Barley | cytosol, plastid | 43.98 | 46.47 |
| TraesCS7A01G216600.1 | Wheat | cytosol, plastid | 24.67 | 44.17 |
| OQU76269 | Sorghum | plasma membrane | 26.9 | 39.28 |
| OQU76268 | Sorghum | plasma membrane | 9.32 | 38.7 |
| EES09243 | Sorghum | plasma membrane | 24.75 | 38.41 |
| OQU82858 | Sorghum | cytosol, peroxisome, plasma membrane | 27.39 | 37.73 |
| KXG19831 | Sorghum | plasma membrane | 27.39 | 36.24 |
| KXG19807 | Sorghum | plasma membrane | 6.27 | 35.85 |
| OQU85243 | Sorghum | plasma membrane | 24.34 | 34.75 |
| KXG35244 | Sorghum | plasma membrane | 21.04 | 34.55 |
| OQU92813 | Sorghum | endoplasmic reticulum, plasma membrane | 22.28 | 32.93 |
| OQU84100 | Sorghum | plasma membrane | 25.0 | 32.83 |
| EES07991 | Sorghum | plasma membrane | 25.66 | 32.67 |
| KXG27752 | Sorghum | plasma membrane | 25.74 | 32.43 |
| KXG33698 | Sorghum | plasma membrane | 25.58 | 31.57 |
| OQU83898 | Sorghum | plasma membrane | 23.35 | 29.7 |
| EER89615 | Sorghum | cytosol, peroxisome, plasma membrane | 6.19 | 27.78 |
| KXG19808 | Sorghum | cytosol, peroxisome, plasma membrane | 6.44 | 26.35 |
| EER89616 | Sorghum | plasma membrane | 5.94 | 25.62 |
Protein Annotations
| MapMan:35.2 | EntrezGene:8072803 | UniProt:A0A1W0VSN6 | GO:GO:0005575 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:OQU76264 | ProteinID:OQU76264 |
| ProteinID:OQU76264.1 | PFAM:PF13962 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF43 | EnsemblPlantsGene:SORBI_3010G122200 |
| TMHMM:TMhelix | UniParc:UPI0009DC83DC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:14180860..14187085
Molecular Weight (calculated)
134208.0 Da
IEP (calculated)
8.112
GRAVY (calculated)
0.056
Length
1212 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATDVQIERA IAPANTTTTP EASNDEVENS NAHDDSDKVV SIATAIGGGG STGQDSMGDS STRSSLVEFD FLWKLRKYLV LLASLAVGVT YNSGLTPPGG
0101: FWNKTKDGHE AGDPALRVEF YERYEVFFYC NATAFAASLV LIILLLSKRV TKQELWLRSM QFTMLVDLFS LMAAYVAGSC RALKSSIYIL VLFIIAFAYI
0201: LIHILVSTRI VPETFKKKVT TKVNEILSKL GIPDVQSSRK EKKDLEEARK FILMLVTFAA TATYQAGLSP PGGFWAENDY KQRPATPVLR RHYLPRYNIF
0301: ISCNSTSFVA SLVTIILLLS PELSRHGIRS KAVIVCVLAD LFFLIGAYAA GCCRDVATSF YVMFIIIIVL ICIVLLAWIF AYDPVAECLR NIKSSTKRCM
0401: SLVLSSNGGS IRLSHTDQEG SNARYQQASV HGPGAPTGEL ELQSTVNQHV SNTESSVEYP PMDNQKTENT GKSFSTSWHT SANIPQSENT KDMSNLKHES
0501: TDNQLVPNME SLTSTEHPSF SYQETSDSNG MSADRQQVVG VNDGKSSDDV RTTDMPATGS SEQTMLVCDS NGATNDVIED ERPSLPAETV VNVESAEQHS
0601: SMGYSNHDIE NGGVNNNAEH ENGNGHINSH QGAPDKNSHG NSTEDHLEKT RTYLLLLAIL AVSLTYQSGL NPPGGFWSRS ENNHSAGDRV LEDNDHPRFI
0701: AFFYLNAVAF VASIVIIVVL LEKTMSRKVT KHRVLQLAMI VDLLSLTGAF VMGSCREPKK SISTSILLFL VPAYVALHVL AFHVISPLVP DKVKQLSCGN
0801: VWSAFVQLCH KQTGNKTEAK ELERRRNLLL TLSIIAATVT YQAGINPPGS VWSDDKDVSG RPGNPILQDN HPRRYDVFYY SNSISFVSSV AITILLVNKE
0901: SCEHGIKSYA LRVCLVVGLV GLLVAYVAGS CRYQKQSIFV IIIAVAVLVS LVIQVLLSSM YETLRTPLAK LMDCLQQLME SLQKWFFRTE EVRREIIIPE
1001: SQETKECGKK RERKRHKYLM LIATLAASVT YQAGLNPPGG FRSDDDDNGH FAGDPLLRDI NHRRYKTFFC FNAISFMASI VVIMLLLSKS IRKKPVRLEV
1101: LLLIMILDLL SVMTAFAAGS CRKLSTSIYV FLLVAGVVIY LVFFVVISRA IGKCHKKWKT VVLFCSRCTV CVSSTSTSVP RMIALKVFFG QLLWRAKKKY
1201: FPDIETWLEQ VV
0101: FWNKTKDGHE AGDPALRVEF YERYEVFFYC NATAFAASLV LIILLLSKRV TKQELWLRSM QFTMLVDLFS LMAAYVAGSC RALKSSIYIL VLFIIAFAYI
0201: LIHILVSTRI VPETFKKKVT TKVNEILSKL GIPDVQSSRK EKKDLEEARK FILMLVTFAA TATYQAGLSP PGGFWAENDY KQRPATPVLR RHYLPRYNIF
0301: ISCNSTSFVA SLVTIILLLS PELSRHGIRS KAVIVCVLAD LFFLIGAYAA GCCRDVATSF YVMFIIIIVL ICIVLLAWIF AYDPVAECLR NIKSSTKRCM
0401: SLVLSSNGGS IRLSHTDQEG SNARYQQASV HGPGAPTGEL ELQSTVNQHV SNTESSVEYP PMDNQKTENT GKSFSTSWHT SANIPQSENT KDMSNLKHES
0501: TDNQLVPNME SLTSTEHPSF SYQETSDSNG MSADRQQVVG VNDGKSSDDV RTTDMPATGS SEQTMLVCDS NGATNDVIED ERPSLPAETV VNVESAEQHS
0601: SMGYSNHDIE NGGVNNNAEH ENGNGHINSH QGAPDKNSHG NSTEDHLEKT RTYLLLLAIL AVSLTYQSGL NPPGGFWSRS ENNHSAGDRV LEDNDHPRFI
0701: AFFYLNAVAF VASIVIIVVL LEKTMSRKVT KHRVLQLAMI VDLLSLTGAF VMGSCREPKK SISTSILLFL VPAYVALHVL AFHVISPLVP DKVKQLSCGN
0801: VWSAFVQLCH KQTGNKTEAK ELERRRNLLL TLSIIAATVT YQAGINPPGS VWSDDKDVSG RPGNPILQDN HPRRYDVFYY SNSISFVSSV AITILLVNKE
0901: SCEHGIKSYA LRVCLVVGLV GLLVAYVAGS CRYQKQSIFV IIIAVAVLVS LVIQVLLSSM YETLRTPLAK LMDCLQQLME SLQKWFFRTE EVRREIIIPE
1001: SQETKECGKK RERKRHKYLM LIATLAASVT YQAGLNPPGG FRSDDDDNGH FAGDPLLRDI NHRRYKTFFC FNAISFMASI VVIMLLLSKS IRKKPVRLEV
1101: LLLIMILDLL SVMTAFAAGS CRKLSTSIYV FLLVAGVVIY LVFFVVISRA IGKCHKKWKT VVLFCSRCTV CVSSTSTSVP RMIALKVFFG QLLWRAKKKY
1201: FPDIETWLEQ VV
001: MEINGQEGHR YEESSSEWFV KYLKRQGDWL EKTRGNLMVT ATVIAGMSFQ VMVNPPGGVW QSDNCSFGNQ TGTAPFCKGR AGTAVLEYES SKRIAYIGMI
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
101: ISSTVSFSTS MSLILLVISG IRLRNRMIMA ILGTFMVVAV LCISAAFFFA IVLVQSDDQI IRYILLIYVG FWVVFPVLIL LIQLVRFIGW LICFMCCCCC
201: PRRRRFH
Arabidopsis Description
AT3G13950 protein [Source:UniProtKB/TrEMBL;Acc:B9DG91]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.