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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0293500-01 Rice plasma membrane 42.9 46.26
TraesCS7B01G124200.1 Wheat plasma membrane 45.29 46.19
TraesCS7D01G218600.1 Wheat plasma membrane 45.18 46.08
KXG35244 Sorghum plasma membrane 36.08 45.12
TraesCS2B01G139800.1 Wheat plasma membrane 39.87 43.6
HORVU2Hr1G020740.1 Barley plasma membrane 40.09 42.77
Os06t0294000-01 Rice plasma membrane 41.6 41.83
OQU85243 Sorghum plasma membrane 38.14 41.46
OQU92813 Sorghum endoplasmic reticulum, plasma membrane 36.62 41.22
EES07991 Sorghum plasma membrane 41.82 40.55
KXG27752 Sorghum plasma membrane 41.5 39.81
KXG33698 Sorghum plasma membrane 41.6 39.1
Os06t0294400-00 Rice plasma membrane 26.0 37.33
OQU83898 Sorghum plasma membrane 37.59 36.41
OQU76269 Sorghum plasma membrane 32.39 36.02
EES09243 Sorghum plasma membrane 30.34 35.85
KXG19807 Sorghum plasma membrane 7.91 34.43
OQU82858 Sorghum cytosol, peroxisome, plasma membrane 32.83 34.43
KXG19831 Sorghum plasma membrane 33.26 33.52
OQU76268 Sorghum plasma membrane 10.18 32.19
EER89616 Sorghum plasma membrane 8.02 26.33
EER89631 Sorghum plasma membrane 34.13 25.51
KXG19808 Sorghum cytosol, peroxisome, plasma membrane 8.13 25.34
OQU76264 Sorghum plasma membrane 32.83 25.0
EER89615 Sorghum cytosol, peroxisome, plasma membrane 7.26 24.81
Os06t0294200-01 Rice cytosol, peroxisome, plasma membrane 0.0 0.0
Protein Annotations
EnsemblPlants:OQU84100EnsemblPlantsGene:SORBI_3005G228501GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:PGG_dom
PANTHER:PTHR24177PANTHER:PTHR24177:SF51PFAM:PF13962ProteinID:OQU84100ProteinID:OQU84100.1SEG:seg
TMHMM:TMhelixUniParc:UPI000B8BA4AFUniProt:A0A1Z5RK24MapMan:35.2::
Description
hypothetical protein
Coordinates
chr5:-:71584292..71587909
Molecular Weight (calculated)
100435.0 Da
IEP (calculated)
9.281
GRAVY (calculated)
0.170
Length
923 amino acids
Sequence
(BLAST)
001: MPSSEAGVQE AEEPRESSEY KLRKQLLLLA ALVVSVTYVA GLNPPGGVWQ QDGPAPAPAP APAAAAGGVS INAGAPILRF THRRRFLSFY YCNSTALAAS
101: LVVIFLLLLK NPNRVQLTVL RLVMVLDLLG LMGAYLAGSC RDKPATVYTT SLVLALSAYV GVHILQGLSH DSSPSSPAAA AEEEEERKDG RVLLRPKEQR
201: KVLLLLATFA TAITYVAGLN LPGGFWDTFD DDGRRRHGHR YRPGESLVEA HHRGHLRMFF YCNTTAFVAS LFIIVLLLHP EKKNKLTASS TRSFALHVFV
301: LGSLLGLMAA YDAGSCRDSD CSVYVVSLFG AVLAFIFLTM LVIMSVKGLS CAHPRNHAPS SPAPAADWSS HTDCDHRDDD DEEHGSQTMS SSPPPPPATS
401: SPNGQEAGSV GSIITGDEAA TVHLEKKKAI KKVKSLILLL ANLATTITYQ AGLDPPGGFW PEDGEGHRAG DAILLSKDPA RYNYKAFFYC NSTAFVVSLV
501: VILMVQKEKL VKSHTLLVAM TLDMFALIGA YAAGSCRDLR TSVHVVALAG AILVYVFVHV LIFTMGTTDV DARVPEKKHK RLLLVAILVA TITYQVGLAP
601: PGGFWNEDDS PRYRHAGDAV LLDRFPRRFK VFFYSNTVSF MASIALILLL VNPILSRLAI RCYALYACQV VGLFGLMAAY TAGSARKLRT SIFACVLIAA
701: VIAFVLVNTI TLTFFNKRRR MMAWADEAPS SSSMAQQQPR RQPQETEYRD EVYAKRKYLM LLGILAASVT YQAGLAPPGG LWQDDGGDGG GTRRSREAGN
801: PVLHDTDPRR YHVFFYSNST SFVASIVTIA LLLQQILRRH HRSNQKLLLI ATNTALVLDL LGLLAAYAAG STREWRNVVV LPLLVLLFMA IHVAVWLFGE
901: RRRCAAGEDG GTSTSKGRGL ESN
Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)
001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.