CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82858	Sorghum	cytosol, peroxisome, plasma membrane	75.93	67.39
Os11t0144900-01	Rice	plasma membrane	72.86	64.22
TraesCS5D01G140600.1	Wheat	plasma membrane	69.27	62.33
TraesCS5B01G132500.1	Wheat	plasma membrane	72.34	62.29
TraesCS5A01G132400.1	Wheat	plasma membrane	71.7	61.81
HORVU5Hr1G043010.1	Barley	plasma membrane	71.83	61.65
KXG19807	Sorghum	plasma membrane	11.78	43.4
OQU76269	Sorghum	plasma membrane	38.8	36.51
KXG19831	Sorghum	plasma membrane	42.25	36.03
OQU92813	Sorghum	endoplasmic reticulum, plasma membrane	35.72	34.02
KXG35244	Sorghum	plasma membrane	30.99	32.79
OQU85243	Sorghum	plasma membrane	33.93	31.21
Os12t0141000-01	Rice	plasma membrane	9.22	31.17
OQU84100	Sorghum	plasma membrane	35.85	30.34
KXG19808	Sorghum	cytosol, peroxisome, plasma membrane	11.4	30.07
EER89616	Sorghum	plasma membrane	10.76	29.89
EES07991	Sorghum	plasma membrane	36.11	29.62
KXG33698	Sorghum	plasma membrane	36.88	29.33
EER89615	Sorghum	cytosol, peroxisome, plasma membrane	10.12	29.26
KXG27752	Sorghum	plasma membrane	35.08	28.48
OQU83898	Sorghum	plasma membrane	33.42	27.39
EER89631	Sorghum	plasma membrane	39.18	24.78
OQU76264	Sorghum	plasma membrane	38.41	24.75
OQU76268	Sorghum	plasma membrane	7.68	20.55

Protein Annotations

MapMan:35.2	UniProt:C5Y4H6	ncoils:Coil	EnsemblPlants:EES09243	ProteinID:EES09243	ProteinID:EES09243.3
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0090305	PFAM:PF13962	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF59
EnsemblPlantsGene:SORBI_3005G031100	TMHMM:TMhelix	UniParc:UPI000B8BA67E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:2775069..2777414

Molecular Weight (calculated)

85298.5 Da

IEP (calculated)

9.280

GRAVY (calculated)

0.517

Length

781 amino acids

Sequence
(BLAST)

001: MILNQLGLMG SYAAGSCREV AMSAYVLALV GMVSSYVCAH VLFFALWALR ARARARRGGG GKSAAAPEPP EAVERARKDL LIFATLVATV TYEAGLSTPG
101: GFLSSDSLDQ DRLAGDPMLR GHRFMAFFYL NTTAFVASLV IIMLLMSRTV TRHGFRSCAL WVCTGAALVG LTGAFAIGSS RSVKTSVYVV ALVAAVLLYI
201: GLQILVFLCK PVGDWLGNVQ GTLRRFLKLE QIPPQGDADE QAQGLFDRQG NLDADQLLKK SRMYLLLLGI LAASVTYQAG LNPPGGFWQS NATDGLHHYL
301: AGDPVLHITY PRRYLVFFYC NATAFVASLV ILILLLSSTF STQGIKYYAL QVAMILDLLG LIGAYAAGSC RQVSKSVYIS VIVVPVFLYV GIHVLVFMLE
401: VFPNHATWRD MVKHKLEESV PEWLKKLFEP QTEEEDEELK WKLEKSRKLL LLLAILAAGL TYQAGMSPPG GFWQQNKTGH VVGNPVLNDN YPRRYLAFFY
501: CNATAFVASL AIIMLLVNRK LSTKGIQSYA LRVCVILDLV GLMGAFAAGS SRKVSTSIYV FVLVFAVLIC IALQVILVVS ESVQGLLQRL LSFFDVTEDE
601: AGDRLPHTAA DAEAEDPWYK KLPKYLLLLA ALAAAVTYQA AMSPPGGLWG DGQAGHIAGD PVLRSTYPRR YKAFFYCNAT SFMASLVIMV LLLIKRVSSA
701: QSAILALHAA MILDLFGLMG AYAAGSCRRV RTSAYILALV VGVSTYIVVL VVVSIGIAKW MKRVMCGMRE RLIRCFSVED L

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.