Factsheet for HORVU5Hr1G043010.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G140600.1	Wheat	plasma membrane	88.35	92.63
TraesCS5B01G132500.1	Wheat	plasma membrane	91.65	91.95
TraesCS5A01G132400.1	Wheat	plasma membrane	91.54	91.94
Os11t0144900-01	Rice	plasma membrane	70.44	72.35
EES09243	Sorghum	plasma membrane	61.65	71.83
Os12t0141000-01	Rice	plasma membrane	17.69	69.7
Zm00001d052478_P001	Maize	plasma membrane	68.35	68.13
OQU82858	Sorghum	cytosol, peroxisome, plasma membrane	65.71	67.95
HORVU7Hr1G044160.1	Barley	plasma membrane	44.4	42.08
HORVU6Hr1G086570.5	Barley	plasma membrane	37.8	41.1
HORVU7Hr1G044210.1	Barley	plasma membrane	43.63	41.1
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	38.68	37.69
HORVU7Hr1G044100.8	Barley	cytosol, peroxisome	36.81	37.51
HORVU3Hr1G100030.1	Barley	plastid	37.91	37.5
HORVU4Hr1G089880.1	Barley	plasma membrane, vacuole	41.98	37.34
HORVU7Hr1G044080.2	Barley	golgi, plasma membrane	18.02	37.19
HORVU2Hr1G020740.1	Barley	plasma membrane	34.29	36.07
HORVU2Hr1G078430.3	Barley	peroxisome	12.53	35.96
HORVU4Hr1G089890.1	Barley	plasma membrane, vacuole	41.98	33.57
HORVU2Hr1G006360.2	Barley	plasma membrane, vacuole	33.19	33.52
HORVU7Hr1G044020.6	Barley	cytosol, peroxisome	11.32	32.49
HORVU3Hr1G017270.1	Barley	plastid	6.26	31.15
HORVU7Hr1G006800.1	Barley	peroxisome	33.85	29.93
HORVU7Hr1G043880.1	Barley	plasma membrane	38.13	28.35
HORVU7Hr1G043810.5	Barley	plasma membrane	41.1	27.89
HORVU6Hr1G091490.1	Barley	cytosol, peroxisome, plasma membrane	7.14	27.78
HORVU7Hr1G021190.5	Barley	nucleus	21.32	27.71
HORVU2Hr1G032190.3	Barley	cytosol	7.36	27.35
HORVU6Hr1G091530.1	Barley	cytosol, peroxisome	7.25	26.51
HORVU7Hr1G043950.7	Barley	cytosol, plastid	30.99	24.59
HORVU6Hr1G091460.3	Barley	plasma membrane	6.15	21.62
HORVU1Hr1G003560.1	Barley	cytosol, plasma membrane, vacuole	5.6	20.65

Protein Annotations

EnsemblPlants:HORVU5Hr1G043010.1	EnsemblPlantsGene:HORVU5Hr1G043010	GO:GO:0005575	GO:GO:0016020	InterPro:PGG_dom	ncoils:Coil
PANTHER:PTHR24177	PANTHER:PTHR24177:SF59	PFAM:PF13962	SEG:seg	TMHMM:TMhelix	UniParc:UPI000295665C
UniProt:M0YLU6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:328349105..328352375

Molecular Weight (calculated)

98860.8 Da

IEP (calculated)

9.104

GRAVY (calculated)

0.488

Length

910 amino acids

Sequence
(BLAST)

001: MAPAAVGLSL ERIAMAPTVP PSGIGVDSAT AEAELLWELR KYVLLLATLA VSVTYSAGLS PPGGFWSDDD ADADGGARLA GDPVLLVTYP RRYKAFFYCN
101: ATAFVASLVI VNLLLVRSLC HRRRWLRALQ AAMLLDQFGL MGAYAAGSCR DVAMSAYVFV LVALVACYVS AHVLVFVLFA PTARGHEVTP ADRVDRARKY
201: LLIFATLAAT VTYQAGVSTP GGFWPGSQGS DHLAGDPMLR VHHPSRFMVF FYSNTTAFVA SLVVVMLLMS NTVTQHGFRS CALWVCTGAA MVGLMGAFAS
301: GSCRSLKTSM YVVALAAAVL FYIAIQALVF LCKPVENLIH DVQQALERYL NKFERLEQQN QQQQQQSRAS EHGDDDAYQI LRKSRMYLLL LGILAASVTY
401: QTGLNPPGGF WQADAAAHGR HHYLAGDPIL HITYPRRYLA FFYCNATAFV ASLVILILLL SNILSTQGIK YCALQIAMIL DLFGLIGAYA AGSCRQVSKS
501: VYVSLLVVPV FLYVGIHVVV FMLEVWPARP AWSQKLSEKM ELCAPSWLKE VLEHPENGEQ EAADIERALE KRRKLLLLLA ILAASLTYQA GMSPPGGFWQ
601: ESKLGRVAGD PVLNDNYPRR YVAFFYCNAT AFVASLAVIM LLVNRKLSEG GIRSHALRVC VILDLVGLMG AFAAGSCRKV STSIYVLVLI FAVLLCIVLQ
701: VTLVLSETAR GLAKRLLSKL GAVEDQAGAD GRHGTPVAAR RARDLWDEKL PKYLLLLAAL AAAVTYQAAM SPPGGLWGDG VLTGHIAGDP VLTSNYPRRY
801: KAFFYCNATS FMASLVIMVL LLIKRVSDTP PALLALHAAM MLDLFGLMGA YAAGSCRRVR TSAYVLALVV GVSAYIVVLV VASIGIARRL RGAMNKLSEQ
901: VTRCFSVYDM

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.