Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030604_P001 | Maize | plasma membrane | 28.04 | 86.2 |
| OQU82858 | Sorghum | cytosol, peroxisome, plasma membrane | 82.48 | 85.57 |
| Zm00001d000425_P001 | Maize | plasma membrane | 22.45 | 85.42 |
| TraesCS5D01G140600.1 | Wheat | plasma membrane | 66.7 | 70.16 |
| TraesCS5A01G132400.1 | Wheat | plasma membrane | 68.67 | 69.21 |
| TraesCS5B01G132500.1 | Wheat | plasma membrane | 68.67 | 69.13 |
| Os11t0144900-01 | Rice | plasma membrane | 66.81 | 68.85 |
| HORVU5Hr1G043010.1 | Barley | plasma membrane | 68.13 | 68.35 |
| Os12t0141000-01 | Rice | plasma membrane | 16.1 | 63.64 |
| Zm00001d037375_P001 | Maize | plasma membrane | 9.42 | 40.57 |
| Zm00001d037389_P001 | Maize | plasma membrane | 42.28 | 40.46 |
| Zm00001d045859_P001 | Maize | plastid | 24.75 | 38.37 |
| Zm00001d012387_P001 | Maize | plasma membrane | 22.02 | 38.07 |
| Zm00001d048772_P001 | Maize | plasma membrane | 33.95 | 37.76 |
| Zm00001d028649_P001 | Maize | plasma membrane | 36.8 | 37.17 |
| Zm00001d045793_P001 | Maize | plasma membrane | 33.95 | 36.34 |
| Zm00001d045774_P001 | Maize | plasma membrane | 10.3 | 32.3 |
| Zm00001d045778_P001 | Maize | plasma membrane | 8.87 | 29.45 |
| Zm00001d037386_P001 | Maize | plasma membrane | 39.21 | 28.82 |
| Zm00001d029728_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 8.76 | 19.14 |
Protein Annotations
| EnsemblPlants:Zm00001d052478_P001 | EnsemblPlants:Zm00001d052478_T001 | EnsemblPlantsGene:Zm00001d052478 | EntrezGene:103654335 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF59 | PFAM:PF13962 | ProteinID:AQK57315.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004DEA091 | UniProt:A0A1D6QHG9 | MapMan:35.2 | : |
Description
Embryogenesis transmembrane protein-like
Coordinates
chr4:+:190886721..190889462
Molecular Weight (calculated)
99055.0 Da
IEP (calculated)
9.208
GRAVY (calculated)
0.495
Length
913 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQYPELVLD DLPAAPPPPP AGMVTTARDA YFLWELRKYV LLQATLAASV TYSAGLSPPG GVWPDNNDST SSANPRLAGD PVLQVTYARR YGVFFYSNAT
101: AFVASVVTIN LLLMQSLSRH RGWLRALQAV MILNQLGLMA AYAAGSCREL AMSAYVVALV AMVALYVCAH VLLFALCALR RRGAVAADDA AAPAQAPPDE
201: EPGAVERSRK YLLIFATLVA TVTYQAGLST PGGFLSNSQD DGDHLAVAGD PVLPGRFMGF FYFNTTAFVA SLVVIMLLMS RTVTRHGLRS CALWVCTGAA
301: LVGLVGAFAV GSSRSLKTSV YVVALVVAVL SYIGLQVLVF FCKPVETWVH NVQGTLQRYL KLESSSSQDP RARLRAVQET AEADQLLRKS RMYLLLLGIL
401: AASVTYQAGL NPPGGFWQAR AADGVHHYLP GDPVLHNTYP GRYLAFFYCN ATAFVASLVI LILLLSNVFS TQGIKYCALQ VAMIMDLLGL IGAYAAGSCR
501: QVSKSVYVSV LVIPVFLYVG VHVMVFMLQV FPNIGTWRRT VRDRLEEAVP RCLKKLFELP PEEDDEDMRW KLEKRRKLLL LLAILAASLT YQAGLNPPGG
601: FWQENSTGHV VGNPVLNDNY RRRYMAFFYC NATAFVSSLA IIMLLVNRKL SARGIQSHAL GVCVVLDLAG LMGAFAAGSS RKVSTSIYVL VLVVAVLLCI
701: TLQVVLVVSE SVQRLLQRLL SVFDVTEGDA GFVLPHVAAA ASNGEPRDPW YEKKPKYLLL LAALAAAVTY QAAMNPPGGL WDDGHSGHVA GDPVLRSSHP
801: SRYRAFFYCN ATSFMASLVI MVLLLMKRVC RAKQAILALH AAMILTLFGL MGAYAAGSCR RVRTSAYILA LVIGVSVYIV VLVVVSIGVA KRLKGVVDEL
901: AERVVWCFSA EDL
101: AFVASVVTIN LLLMQSLSRH RGWLRALQAV MILNQLGLMA AYAAGSCREL AMSAYVVALV AMVALYVCAH VLLFALCALR RRGAVAADDA AAPAQAPPDE
201: EPGAVERSRK YLLIFATLVA TVTYQAGLST PGGFLSNSQD DGDHLAVAGD PVLPGRFMGF FYFNTTAFVA SLVVIMLLMS RTVTRHGLRS CALWVCTGAA
301: LVGLVGAFAV GSSRSLKTSV YVVALVVAVL SYIGLQVLVF FCKPVETWVH NVQGTLQRYL KLESSSSQDP RARLRAVQET AEADQLLRKS RMYLLLLGIL
401: AASVTYQAGL NPPGGFWQAR AADGVHHYLP GDPVLHNTYP GRYLAFFYCN ATAFVASLVI LILLLSNVFS TQGIKYCALQ VAMIMDLLGL IGAYAAGSCR
501: QVSKSVYVSV LVIPVFLYVG VHVMVFMLQV FPNIGTWRRT VRDRLEEAVP RCLKKLFELP PEEDDEDMRW KLEKRRKLLL LLAILAASLT YQAGLNPPGG
601: FWQENSTGHV VGNPVLNDNY RRRYMAFFYC NATAFVSSLA IIMLLVNRKL SARGIQSHAL GVCVVLDLAG LMGAFAAGSS RKVSTSIYVL VLVVAVLLCI
701: TLQVVLVVSE SVQRLLQRLL SVFDVTEGDA GFVLPHVAAA ASNGEPRDPW YEKKPKYLLL LAALAAAVTY QAAMNPPGGL WDDGHSGHVA GDPVLRSSHP
801: SRYRAFFYCN ATSFMASLVI MVLLLMKRVC RAKQAILALH AAMILTLFGL MGAYAAGSCR RVRTSAYILA LVIGVSVYIV VLVVVSIGVA KRLKGVVDEL
901: AERVVWCFSA EDL
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.