Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19808 | Sorghum | cytosol, peroxisome, plasma membrane | 85.91 | 84.46 |
| TraesCS7D01G216100.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.95 | 55.09 |
| TraesCS7A01G214000.1 | Wheat | cytosol, peroxisome, plasma membrane | 53.61 | 54.55 |
| Zm00001d045778_P001 | Maize | plasma membrane | 37.46 | 39.64 |
| Zm00001d037375_P001 | Maize | plasma membrane | 23.71 | 32.55 |
| Zm00001d045859_P001 | Maize | plastid | 23.02 | 11.38 |
| Zm00001d012387_P001 | Maize | plasma membrane | 19.93 | 10.98 |
| Zm00001d052478_P001 | Maize | plasma membrane | 32.3 | 10.3 |
| Zm00001d048772_P001 | Maize | plasma membrane | 27.84 | 9.87 |
| Zm00001d028649_P001 | Maize | plasma membrane | 30.24 | 9.73 |
| Zm00001d037389_P001 | Maize | plasma membrane | 29.9 | 9.12 |
| Zm00001d037386_P001 | Maize | plasma membrane | 29.21 | 6.84 |
| Zm00001d045793_P001 | Maize | plasma membrane | 17.18 | 5.86 |
| Zm00001d000425_P001 | Maize | plasma membrane | 2.41 | 2.92 |
| Zm00001d030604_P001 | Maize | plasma membrane | 2.75 | 2.69 |
| Zm00001d029728_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 3.44 | 2.39 |
Protein Annotations
| EnsemblPlants:Zm00001d045774_P001 | EnsemblPlants:Zm00001d045774_T001 | EnsemblPlantsGene:Zm00001d045774 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF84 | PFAM:PF13962 | ProteinID:AQL03147.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002213E9C | UniProt:K7W823 | MapMan:35.2 | : | : |
Description
Embryogeneis transmembrane protein
Coordinates
chr9:-:38442217..38443591
Molecular Weight (calculated)
32244.4 Da
IEP (calculated)
7.830
GRAVY (calculated)
0.064
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCPINVEEA QRSRAITVAD CAPGDATPAV TEISATGKRG IPVLVAPLHS QRECEGSGGR RASAEEMMSM GFQGFLLLEE KDDDDPVAQR KKWFKEMRGW
101: LMVLATVAAS VTYQAGLNPP GGFWQDGDRA GNPVLRDRHW SRYMIFYYLN ATAFVTSLVI MVLLMNERFY HTETKVVALM LTTFIDLISL IGAYIAGTTR
201: FFSSCIYIIV IVCVAFAGVI YFGEVMAEIC KFTVRKMPCM LRLTQNKWFP MPAEVVKGLQ QEEERISQKR TTAGNGQRGG CCACCAPRAE G
101: LMVLATVAAS VTYQAGLNPP GGFWQDGDRA GNPVLRDRHW SRYMIFYYLN ATAFVTSLVI MVLLMNERFY HTETKVVALM LTTFIDLISL IGAYIAGTTR
201: FFSSCIYIIV IVCVAFAGVI YFGEVMAEIC KFTVRKMPCM LRLTQNKWFP MPAEVVKGLQ QEEERISQKR TTAGNGQRGG CCACCAPRAE G
001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.