Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 6
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030604_P001 | Maize | plasma membrane | 82.08 | 66.33 |
| Zm00001d052478_P001 | Maize | plasma membrane | 85.42 | 22.45 |
| Zm00001d012387_P001 | Maize | plasma membrane | 32.92 | 14.96 |
| Zm00001d045793_P001 | Maize | plasma membrane | 35.83 | 10.08 |
| Zm00001d048772_P001 | Maize | plasma membrane | 30.83 | 9.01 |
| Zm00001d037389_P001 | Maize | plasma membrane | 34.58 | 8.7 |
| Zm00001d028649_P001 | Maize | plasma membrane | 30.83 | 8.19 |
| Zm00001d037386_P001 | Maize | plasma membrane | 35.42 | 6.84 |
| Zm00001d037375_P001 | Maize | plasma membrane | 2.5 | 2.83 |
| Zm00001d045778_P001 | Maize | plasma membrane | 2.92 | 2.55 |
| Zm00001d045774_P001 | Maize | plasma membrane | 2.92 | 2.41 |
| Zm00001d045859_P001 | Maize | plastid | 5.83 | 2.38 |
| TraesCS5B01G345200.1 | Wheat | plasma membrane | 0.42 | 0.41 |
| Zm00001d029728_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d000425_P001 | EnsemblPlants:Zm00001d000425_T001 | EnsemblPlantsGene:Zm00001d000425 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PGG_dom | ncoils:Coil | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF59 | PFAM:PF13962 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00084272F5 | UniProt:A0A1X7YIK9 | MapMan:35.2 | : | : |
Description
Embryogenesis transmembrane protein-like
Coordinates
chrB73V4_ctg219:+:9506..12192
Molecular Weight (calculated)
25561.1 Da
IEP (calculated)
8.883
GRAVY (calculated)
0.437
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFFYCNATA FVSSLTIIML LVNRKLSARG IQSHALGVCV VLDLAGLMGA FAAGSSRKVS TSIYVLVLVV AVLLCITLQV VLVVSESVQR LLQRLLSVFD
101: VTEGDAGFVL PHVAAAASNG EPRDPWYEKK PKYLLLLAAL AAAVTYQAAM NPPGGLWDDG QTGHVAGDPV LRSSHPSRYR AFFYCNATSF MASLVIMQAA
201: GVASAIASSA AAAQAANVVH QTYEKVRRER EEAQAAARRE
101: VTEGDAGFVL PHVAAAASNG EPRDPWYEKK PKYLLLLAAL AAAVTYQAAM NPPGGLWDDG QTGHVAGDPV LRSSHPSRYR AFFYCNATSF MASLVIMQAA
201: GVASAIASSA AAAQAANVVH QTYEKVRRER EEAQAAARRE
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.