Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89616 | Sorghum | plasma membrane | 94.55 | 92.53 |
| Os06t0286146-00 | Rice | nucleus | 57.45 | 57.25 |
| Zm00001d045774_P001 | Maize | plasma membrane | 39.64 | 37.46 |
| Zm00001d037375_P001 | Maize | plasma membrane | 24.0 | 31.13 |
| Zm00001d012387_P001 | Maize | plasma membrane | 22.91 | 11.93 |
| Zm00001d045859_P001 | Maize | plastid | 25.45 | 11.88 |
| Zm00001d048772_P001 | Maize | plasma membrane | 27.64 | 9.26 |
| Zm00001d052478_P001 | Maize | plasma membrane | 29.45 | 8.87 |
| Zm00001d028649_P001 | Maize | plasma membrane | 29.09 | 8.85 |
| Zm00001d037389_P001 | Maize | plasma membrane | 29.82 | 8.6 |
| Zm00001d037386_P001 | Maize | plasma membrane | 27.27 | 6.04 |
| Zm00001d045793_P001 | Maize | plasma membrane | 16.0 | 5.16 |
| Zm00001d000425_P001 | Maize | plasma membrane | 2.55 | 2.92 |
| Zm00001d030604_P001 | Maize | plasma membrane | 2.18 | 2.02 |
| Zm00001d029728_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 2.55 | 1.67 |
Protein Annotations
| EMBL:BT040966 | EnsemblPlants:Zm00001d045778_P001 | EnsemblPlants:Zm00001d045778_T001 | EnsemblPlantsGene:Zm00001d045778 | EntrezGene:100273376 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF45 | PFAM:PF13962 |
| ProteinID:AQL03150.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00017B81A6 | UniProt:B4FV28 | MapMan:35.2 |
Description
Embryogeneis transmembrane protein [Source:UniProtKB/TrEMBL;Acc:B4FV28]
Coordinates
chr9:-:38654012..38655064
Molecular Weight (calculated)
29602.0 Da
IEP (calculated)
5.686
GRAVY (calculated)
0.232
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSVEIPMD RPAASAPPPG AVCDVVDEDE AAPPPGNARP TRVLISPIVP LPADGASADA ALPPAYTGVL YLHRHKWPAV EDDPGKKREK WLKEMRGWLM
101: VLAVLAASVT YQAGLNPPGG FWQQDDAEGN VAGTPVLQSK FPKRYTVFFY FNSTAFVTSV VIIVLLMNES FYHSEAKVEA LEIIVVLDMA GLMGAYIAGC
201: TREVSSSIYI IVLTLVVFLY VVYTAQFLPK LWGLVVDVPF LHKAAQGGAL PVPQDILDGA RPSAGIGRTK SAPPR
101: VLAVLAASVT YQAGLNPPGG FWQQDDAEGN VAGTPVLQSK FPKRYTVFFY FNSTAFVTSV VIIVLLMNES FYHSEAKVEA LEIIVVLDMA GLMGAYIAGC
201: TREVSSSIYI IVLTLVVFLY VVYTAQFLPK LWGLVVDVPF LHKAAQGGAL PVPQDILDGA RPSAGIGRTK SAPPR
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.