Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- endoplasmic reticulum 4
- plasma membrane 5
- extracellular 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000425_P001 | Maize | plasma membrane | 66.33 | 82.08 |
| Zm00001d052478_P001 | Maize | plasma membrane | 86.2 | 28.04 |
| Zm00001d012387_P001 | Maize | plasma membrane | 38.05 | 21.4 |
| Zm00001d045793_P001 | Maize | plasma membrane | 42.76 | 14.89 |
| Zm00001d048772_P001 | Maize | plasma membrane | 37.37 | 13.52 |
| Zm00001d037389_P001 | Maize | plasma membrane | 41.75 | 13.0 |
| Zm00001d028649_P001 | Maize | plasma membrane | 36.03 | 11.84 |
| Zm00001d037386_P001 | Maize | plasma membrane | 38.38 | 9.18 |
| Zm00001d045859_P001 | Maize | plastid | 17.85 | 9.0 |
| Zm00001d045774_P001 | Maize | plasma membrane | 2.69 | 2.75 |
| Zm00001d037375_P001 | Maize | plasma membrane | 1.68 | 2.36 |
| Zm00001d045778_P001 | Maize | plasma membrane | 2.02 | 2.18 |
| Zm00001d029728_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d030604_P001 | EnsemblPlants:Zm00001d030604_T001 | EnsemblPlantsGene:Zm00001d030604 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF59 | PFAM:PF13962 | ProteinID:ONM01160.1 | SEG:seg |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0008426B73 | UniProt:A0A1D6KD46 | MapMan:35.2 | : |
Description
Embryogenesis transmembrane protein-like
Coordinates
chr1:+:147996510..147997695
Molecular Weight (calculated)
32815.6 Da
IEP (calculated)
9.689
GRAVY (calculated)
0.409
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWKLEKRRK LLLLLLAILA ASLTYQAGLN PPGGFWQENI TGHVIGNPVL NDNYRRRYMA FFYCNATAFV SSLAIIMLLV NRKLSARGIQ SHALGVCVVL
101: DLVGLMGAFA AGSSRMVSTS IYVLVLVVAV LLCIMLQVVL VVSESVQRLL QRLLSVFDVT EGDAGFVLPH VAAAASNGEP RDPWYEKKPK YLLLLAALAA
201: AVTYQAAMNP PGGLWDDGQT GHVAGDPVLR SSHPSRYRAF FYCNATSFMA SLVIMQYYTL RYIFRSKIIL HLKAPSCQIN LNLTEFMENG TIVLDPK
101: DLVGLMGAFA AGSSRMVSTS IYVLVLVVAV LLCIMLQVVL VVSESVQRLL QRLLSVFDVT EGDAGFVLPH VAAAASNGEP RDPWYEKKPK YLLLLAALAA
201: AVTYQAAMNP PGGLWDDGQT GHVAGDPVLR SSHPSRYRAF FYCNATSFMA SLVIMQYYTL RYIFRSKIIL HLKAPSCQIN LNLTEFMENG TIVLDPK
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.