Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 2
- vacuole 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037386_P001 | Maize | plasma membrane | 93.3 | 31.4 |
| HORVU7Hr1G044020.6 | Barley | cytosol, peroxisome | 19.62 | 25.87 |
| EER89631 | Sorghum | plasma membrane | 73.44 | 24.86 |
| TraesCS7A01G216900.1 | Wheat | plasma membrane | 45.45 | 22.12 |
| TraesCS7D01G218400.1 | Wheat | nucleus, peroxisome, plasma membrane | 45.69 | 16.04 |
| Os06t0292400-00 | Rice | plasma membrane | 45.93 | 15.76 |
| TraesCS7B01G123900.1 | Wheat | nucleus, peroxisome, plasma membrane | 44.98 | 15.73 |
| Zm00001d045859_P001 | Maize | plastid | 16.75 | 11.88 |
| Zm00001d045793_P001 | Maize | plasma membrane | 19.14 | 9.38 |
| Zm00001d052478_P001 | Maize | plasma membrane | 19.14 | 8.76 |
| Zm00001d037389_P001 | Maize | plasma membrane | 19.62 | 8.6 |
| Zm00001d048772_P001 | Maize | plasma membrane | 16.75 | 8.53 |
| Zm00001d028649_P001 | Maize | plasma membrane | 17.94 | 8.3 |
| Zm00001d045774_P001 | Maize | plasma membrane | 2.39 | 3.44 |
| Zm00001d045778_P001 | Maize | plasma membrane | 1.67 | 2.55 |
| Zm00001d037375_P001 | Maize | plasma membrane | 0.48 | 0.94 |
| Zm00001d012387_P001 | Maize | plasma membrane | 0.96 | 0.76 |
| Zm00001d030604_P001 | Maize | plasma membrane | 0.0 | 0.0 |
| Zm00001d000425_P001 | Maize | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d029728_P001 | EnsemblPlants:Zm00001d029728_T001 | EnsemblPlantsGene:Zm00001d029728 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF43 | PFAM:PF13962 | ProteinID:ONL99506.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00084236FD | UniProt:A0A1D6K7H5 | MapMan:35.2 | : | : |
Description
Embryogenesis transmembrane protein-like
Coordinates
chr1:-:84305846..84307322
Molecular Weight (calculated)
46134.2 Da
IEP (calculated)
7.913
GRAVY (calculated)
-0.110
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLDLFSLMG AYAAYDAGTC RAVKSSIYIW VLVLSVFTYI MIHILVFMRV VPRFVSEKRF VPKRLKDVAR SMERWILSRC GVHRSQKNSS HKKDLEEARK
101: FTLVLVTFAA TVAYQAGLSP PGSFWAENDE NKTPATSMLR SGNLPRYNTF VVCNSTSFIA SLVTIILLLS PELSRHGIKS RAVTVCVVVN ILGLVGAYAA
201: GSCRSVVTFV SAVLVAVLVW IFFAVLAGIF VNRSVAEWFG KKIKPYIMRC TDRFGRVFSS NHGRKRSRNP EGENSIASHQ QTEESIKDIE EGECPGEQQS
301: PGKQQPTNIM VVSISEHASV NEKQAENSSS VMCKLGSQST DPNSAANEAM TETETENIQD ANMEEQQSSL VDGLKTPTTV ADQESTAVEC LSDIAPNNNC
401: NLWERGDGNH KPFVRGEP
101: FTLVLVTFAA TVAYQAGLSP PGSFWAENDE NKTPATSMLR SGNLPRYNTF VVCNSTSFIA SLVTIILLLS PELSRHGIKS RAVTVCVVVN ILGLVGAYAA
201: GSCRSVVTFV SAVLVAVLVW IFFAVLAGIF VNRSVAEWFG KKIKPYIMRC TDRFGRVFSS NHGRKRSRNP EGENSIASHQ QTEESIKDIE EGECPGEQQS
301: PGKQQPTNIM VVSISEHASV NEKQAENSSS VMCKLGSQST DPNSAANEAM TETETENIQD ANMEEQQSSL VDGLKTPTTV ADQESTAVEC LSDIAPNNNC
401: NLWERGDGNH KPFVRGEP
001: MHPIFDAILQ NDLPAFLGLV EARESSLEER SEEQNTNNTV LHVAAKLGHR ELVAKIIELR PSLLSSRNAY GDTPLHLAAL LGDVNIVMQM LDTGLELYSA
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
101: RNNKNQTPLH LAFVSIFMEA AKFIVEKTNS VDLDELNFAL SSGSTCIVGI ILERFPELAR KNAWEVEDGS RSTLLHYACD KGDLELTSIL LGLNQGLEEA
201: LNSKGLSPLH LAVQRGSVII LEEFMDKSPL SFCVRTPSKE TVFHLAARNK NTDAFVFMAE NLGTSSPILL KKKDQQGNTV LHIAASVSCG SPLIRYIVGK
301: KIIDIRDRNN MGYRAYHLLP RQAQDYEFIS SYLRCDTKTS EEVDSKKAER NEPHIGHSEV IRLLKLIEIS TSEIAERKKS KKHHVKRGHK SLEHEMHIEA
401: LQNARNTIAI VAVLIASVSY AGGINPPGGV YQDGPWKGKS LVGNTAAFKV FAICNNIALF TSLCIVILLV SIIPYQRKPL KKLLVATHRM MWVSVGFMAT
501: AYVAASLVTI PHFPGTRWLF PVIISVAGGS LTVLFSYLGV ETISHWFKKM NRVGRGLPIY FIKNNRVEDI PAIAKNEGEM PSLARTNSDL AASEGSGYFT
601: Y
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:F4IPR3]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.