Factsheet for Os06t0292400-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0292100-00	Rice	plasma membrane	48.6	63.66
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	58.54	59.67
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	58.29	59.61
HORVU7Hr1G044020.6	Barley	cytosol, peroxisome	14.94	57.41
TraesCS7A01G216900.1	Wheat	plasma membrane	39.74	56.34
EER89631	Sorghum	plasma membrane	55.83	55.06
Zm00001d037386_P001	Maize	plasma membrane	54.52	53.46
Os06t0291800-00	Rice	plasma membrane	44.75	48.19
Zm00001d029728_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	15.76	45.93
Os12t0141000-01	Rice	plasma membrane	8.29	43.72
Os06t0293000-00	Rice	vacuole	9.93	42.31
Os11t0144900-01	Rice	plasma membrane	29.15	40.07
Os11t0682000-01	Rice	plasma membrane	19.21	37.5
Os06t0297400-03	Rice	plasma membrane	29.31	36.88
Os06t0296700-01	Rice	plasma membrane	25.29	36.19
Os06t0293100-00	Rice	cytosol	14.53	36.05
Os06t0293500-01	Rice	plasma membrane	25.29	35.98
Os06t0295000-01	Rice	cytosol, peroxisome, plasma membrane	11.82	33.18
Os06t0294000-01	Rice	plasma membrane	24.3	32.24
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	16.01	31.91
Os06t0296900-00	Rice	plasma membrane	24.96	31.8
Os06t0296100-00	Rice	plasma membrane	22.66	31.47
Os06t0294400-00	Rice	plasma membrane	16.34	30.95
Os11t0220600-00	Rice	mitochondrion, plasma membrane	6.9	30.55
Os11t0220500-00	Rice	plasma membrane	21.1	30.31
Os06t0285900-00	Rice	nucleus	5.5	28.76
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	3.86	25.54
Os06t0286146-00	Rice	nucleus	5.42	23.91
Os06t0294200-01	Rice	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:4340794	UniProt:A3BAV3	ProteinID:BAS97312.1	ProteinID:EAZ36692.1	GO:GO:0005575
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:Os06g0292400	EnsemblPlants:Os06t0292400-00	PFAM:PF13962	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF43
TMHMM:TMhelix	UniParc:UPI0000E1277D	RefSeq:XP_015643808.1	RefSeq:XP_015643809.1	SEG:seg	:

Description

Embryogenesis transmembrane protein. (Os06t0292400-00)

Coordinates

chr6:-:10738687..10742348

Molecular Weight (calculated)

135593.0 Da

IEP (calculated)

8.034

GRAVY (calculated)

-0.100

Length

1218 amino acids

Sequence
(BLAST)

0001: MENGRQPKLT IALTNTTDVL IPVNGQSEEN NTNGDRAEYG METGSDRQDS MNGLSSRFLL ASSHAPSITV DFELLWRLRK YLVMLAILAV SVTYNAGLTP
0101: PGGFRTKNTT NGRDAGEPLL RVYFFPRYEV FFYCNATAFA ASLVLIILLL SKSVTRQNLW LRSMQFTMIL DLFSLMGAYA AGSCRAVKSS IYIWVLVVAV
0201: FIYVGIHILL CTRIFPKWLK ERVQMLLQKI QAKWGVHEEN RSNDQKRNIE EARKFILTLA TFSATITYQA GLSPPGGFWT EGSSHPATPI LRSNYLLRYN
0301: FFMSCNATSF VASLVTIMLL LSPELSMHGI RSKAVIVCVV ADLLGLIGAY AAGSCRDIAV SFYVMSVSII VLTCFVVLAG ILVYKPVADW LQKIKPDTLT
0401: CIGTIGRVFS LDFKRNRSID REQENSQANH LQTELEPDAQ VKENALQSTD IEEGESHAKN QPSGECQSAN SEEAEPDSDH PSAGYQQSMC STDVVYNLQG
0501: QSIDDQAQPT AEESISNTQH PSEKSQHATN YKDGMHQSAD NQQDANTKEN SSSIDDFKTL KDGISDPEPQ SADSHQVTDM KEQSTMTNDL KTTDTEGSMP
0601: DPDNRSTDSQ HVINKMEQSS STDEPGTVVT PEEKVSPNVP VGHSEIEIAE DNKIAPHVEN GYIDKNERSP NEDGNRNQTA KHLKKCRTYL LLLAILAVSL
0701: TYQSGLNPPG GFWTRHEDYH SSGDHILEDT HHPRYIAFFY LNAIAFVASV VMIIMLLNRR MANKVIKRRA LQIAMIVILL SLTGAYVMGS CRKTKNSVYI
0801: SVMVLLVLAY VGIHVLIAIH VIPEGWKRQV AEKLNRLSCR HLWSPLHGSN QTGHGNEKDW ERRRNLLLIL SILAATVTYQ AGMNPPGSVW SDDKDINRTL
0901: TGNPVLQENN LRRYNVFYYS NSVSFVSSVV ITILLVNKGS CEHGMKFYAL RVCLAAGLVG LLIAYAAGSC RKAKQSIYLI IVAVAVLISL MIQVFIMSST
1001: YDKLGKPLCK CMESLLEWIF QTKEVRQDIG SEIQGSPDPG DKSERKRHKY LMLLSILAAS ITYQAGLNPP GGFWSDDSSD PPKHKAGDPV LHNIHPHRYK
1101: AFFCFNAFSF MSSIVVIMLL LSKSVREKNV PLGVLHLIMI LDLLALMTAF AAGSCRKFRT SVYVYGLVIG VTIYLLLVTI LASSIAKCLR SRKISKNSYE
1201: KHHEHPSRVN TLPLKQQV

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.