Factsheet for Os06t0295000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 2
peroxisome 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0293000-00	Rice	vacuole	27.42	41.61
Os12t0141000-01	Rice	plasma membrane	22.12	41.56
Os06t0294400-00	Rice	plasma membrane	43.09	29.08
Os06t0296700-01	Rice	plasma membrane	46.08	23.5
Os06t0296100-00	Rice	plasma membrane	43.55	21.55
Os06t0294000-01	Rice	plasma membrane	45.16	21.35
Os06t0293500-01	Rice	plasma membrane	41.94	21.26
Os11t0144900-01	Rice	plasma membrane	39.4	19.3
Os06t0296900-00	Rice	plasma membrane	41.01	18.62
Os06t0297400-03	Rice	plasma membrane	38.25	17.15
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	7.14	16.85
Os06t0292100-00	Rice	plasma membrane	33.41	15.59
Os11t0220500-00	Rice	plasma membrane	28.8	14.74
Os06t0285900-00	Rice	nucleus	7.83	14.59
Os11t0682000-01	Rice	plasma membrane	19.82	13.78
Os06t0291800-00	Rice	plasma membrane	34.79	13.35
Os06t0292400-00	Rice	plasma membrane	33.18	11.82
Os06t0286146-00	Rice	nucleus	7.37	11.59
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	9.91	7.04
Os06t0293100-00	Rice	cytosol	7.14	6.31
Os11t0220600-00	Rice	mitochondrion, plasma membrane	0.46	0.73
Os06t0294200-01	Rice	cytosol, peroxisome, plasma membrane	0.23	0.12

Protein Annotations

EnsemblPlants:Os06t0295000-01	EnsemblPlantsGene:Os06g0295000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PGG_dom
ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51	PFAM:PF13962	ProteinID:BAS97331.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000393A16D	UniProt:A0A0P0WVH4	MapMan:35.2	:	:

Description

Hypothetical conserved gene. (Os06t0295000-01)

Coordinates

chr6:-:10871810..10875144

Molecular Weight (calculated)

46659.9 Da

IEP (calculated)

8.759

GRAVY (calculated)

0.330

Length

434 amino acids

Sequence
(BLAST)

001: MPPPPPPPPP GNVAEEQPWE YTLRKYLLLL ATLVATVAYG AGFSPPGGVW SDAKDGVHLA GDPVIRDHYN GRYLLYFYCN ATAFVSSLVV IVLILLFAVL
101: HEKRNVRVTV MPLRAVMVLD LVSLMGAYAA GTCRDRTTTT FTVVLVSLVV VYVALQVVLA SLPAGEHDGD EHVVKEKSRK VLLLLATFAT SLTYVAGLST
201: PGGFWSDSDA AAGHRAGDAV MGDRHPARLT VFLLCNTTAF VASLLVIVLL LDRKLRDGTV RAWELYGCVL VSLAGLVGAY AAGSSRAAHT TAYVVALIGA
301: VLAYIAIHLA VVACAARALS NTGMSEKLAG MYSSVKERRY HLRQPARELA QANDDREKLL NQALEKARSL VLLLATLAAT ITYQAVLDPP GGYWQVDKDG
401: HKAGDPILLT INAKRWCSAG VCGDPYRVLH TRSQ

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.