Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plastid 1
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85243 | Sorghum | plasma membrane | 48.33 | 54.42 |
| Os11t0682000-01 | Rice | plasma membrane | 28.97 | 44.39 |
| Os06t0296700-01 | Rice | plasma membrane | 39.02 | 43.83 |
| Os06t0293500-01 | Rice | plasma membrane | 38.91 | 43.46 |
| Os06t0294000-01 | Rice | plasma membrane | 41.0 | 42.7 |
| Os06t0293100-00 | Rice | cytosol | 21.76 | 42.36 |
| Os06t0295000-01 | Rice | cytosol, peroxisome, plasma membrane | 18.62 | 41.01 |
| TraesCS6B01G003300.1 | Wheat | plasma membrane | 37.34 | 39.76 |
| TraesCS7D01G219200.1 | Wheat | peroxisome | 30.54 | 39.51 |
| Os06t0294400-00 | Rice | plasma membrane | 26.46 | 39.35 |
| Os06t0293000-00 | Rice | vacuole | 11.72 | 39.16 |
| Os06t0296100-00 | Rice | plasma membrane | 35.77 | 39.0 |
| Os06t0295300-00 | Rice | golgi, mitochondrion, nucleus, plasma membrane | 24.79 | 38.79 |
| Os12t0141000-01 | Rice | plasma membrane | 9.31 | 38.53 |
| Os11t0144900-01 | Rice | plasma membrane | 34.31 | 37.02 |
| Os11t0220600-00 | Rice | mitochondrion, plasma membrane | 10.46 | 36.36 |
| Os11t0220500-00 | Rice | plasma membrane | 31.8 | 35.85 |
| Os06t0297400-03 | Rice | plasma membrane | 35.15 | 34.71 |
| Os06t0285900-00 | Rice | nucleus | 7.74 | 31.76 |
| Os06t0292100-00 | Rice | plasma membrane | 30.86 | 31.72 |
| Os06t0291800-00 | Rice | plasma membrane | 31.59 | 26.7 |
| Os04t0168400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 4.92 | 25.54 |
| Os06t0292400-00 | Rice | plasma membrane | 31.8 | 24.96 |
| Os06t0286146-00 | Rice | nucleus | 6.69 | 23.19 |
| Os06t0294200-01 | Rice | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:107275828 | MapMan:35.2 | ProteinID:BAD54426.1 | ProteinID:BAS97346.1 | GO:GO:0005575 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:Os06g0296900 |
| EnsemblPlants:Os06t0296900-00 | PFAM:PF13962 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF44 | UniProt:Q5Z6J3 |
| TMHMM:TMhelix | UniParc:UPI0000447027 | RefSeq:XP_015642286.1 | SEG:seg | : | : |
Description
Conserved hypothetical protein. (Os06t0296900-00)
Coordinates
chr6:+:10973966..10976836
Molecular Weight (calculated)
103263.0 Da
IEP (calculated)
8.410
GRAVY (calculated)
0.174
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDADDNKQ QPGGGGKATV ASHPKSREWQ LRKYLLLLAI LVATVTYIAG LDPPGGVWLE TTDEHLTGDP ILPDTRRLRY DLFYYFNATA FVASLVLTIL
101: LLPFRVEGPR LMAVRGVMVV DLLCLMVAYI AGSCRGRLTT IFASVLSATI FVYIVVHALV APSTDTPEKK TVHDSPDKEK AMDMEDGHLH GCSSNPLDMK
201: EAVEDGKLRP KERRKVLMLL SIFMVTITYT AGLSPPGGTW EHAAEEGGAA AAAGGHHRAG DPVLQEGHYW RFVAFFVLNT VAFVASLTVI MLLLSTSMGN
301: NGRRLSALNV AIAFALLGLM GAYASGSCRE TETTVYVLCL IGAVLLYISC LAVIKFLSKK TKPQAQTHGC CGWMTATARP CPACRSDCAS PTDLGPDPVM
401: PGPCQGEQPT EPSIATGSRR NPASKNREDS TDPVERARSL ILLLATLITT VTYQAGLDPP GGVWRDDDNG HSGGGLILPA THAKRYKVFF YCNSAAFVAS
501: IIVIIMVQSR SLIGRRALEA AVILDLFGLI GAYSAGSCRD VRTSIYVFSL AVAIFVLVVA IYVVISKLPH DKKGKLEEKS KLEKKQKLLL LLAILAVTIT
601: YQAGLTPPGG FWIEHTDEDH RYGDSILADN YPLRYKAFFY CNATSFMASV IAIVCLMSRN LSSIAVGYCN ALYACMAAGL VGLMGAYAAG TTRRLRTSIY
701: VFALVGAVLI FAALHIKFFH KILIGCLSFF SSKKQDEVTK NHDQATGSKG STGKKCTNNH DEETTDEYKE KYKMRKYLTL LGILAASVTY QAGLVPPGSV
801: WPTNDGKGHA AGNPILGDTD GRRYHAFFYS NSTSFSASIV AIVLLLQGTL ILPELNDPDR FGPMHMVVVL DLLGLLVAYA AGSSRDWGTS GYVVAMAVMV
901: LAYVAIYVFL SLRDRKGSEG RATTEVRSSS STSQSSRSTL EVARPASWSS GSADNV
101: LLPFRVEGPR LMAVRGVMVV DLLCLMVAYI AGSCRGRLTT IFASVLSATI FVYIVVHALV APSTDTPEKK TVHDSPDKEK AMDMEDGHLH GCSSNPLDMK
201: EAVEDGKLRP KERRKVLMLL SIFMVTITYT AGLSPPGGTW EHAAEEGGAA AAAGGHHRAG DPVLQEGHYW RFVAFFVLNT VAFVASLTVI MLLLSTSMGN
301: NGRRLSALNV AIAFALLGLM GAYASGSCRE TETTVYVLCL IGAVLLYISC LAVIKFLSKK TKPQAQTHGC CGWMTATARP CPACRSDCAS PTDLGPDPVM
401: PGPCQGEQPT EPSIATGSRR NPASKNREDS TDPVERARSL ILLLATLITT VTYQAGLDPP GGVWRDDDNG HSGGGLILPA THAKRYKVFF YCNSAAFVAS
501: IIVIIMVQSR SLIGRRALEA AVILDLFGLI GAYSAGSCRD VRTSIYVFSL AVAIFVLVVA IYVVISKLPH DKKGKLEEKS KLEKKQKLLL LLAILAVTIT
601: YQAGLTPPGG FWIEHTDEDH RYGDSILADN YPLRYKAFFY CNATSFMASV IAIVCLMSRN LSSIAVGYCN ALYACMAAGL VGLMGAYAAG TTRRLRTSIY
701: VFALVGAVLI FAALHIKFFH KILIGCLSFF SSKKQDEVTK NHDQATGSKG STGKKCTNNH DEETTDEYKE KYKMRKYLTL LGILAASVTY QAGLVPPGSV
801: WPTNDGKGHA AGNPILGDTD GRRYHAFFYS NSTSFSASIV AIVLLLQGTL ILPELNDPDR FGPMHMVVVL DLLGLLVAYA AGSSRDWGTS GYVVAMAVMV
901: LAYVAIYVFL SLRDRKGSEG RATTEVRSSS STSQSSRSTL EVARPASWSS GSADNV
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.