Factsheet for Os04t0168400-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G199100.1	Wheat	plastid	25.54	33.81
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	25.0	26.9
TraesCS2B01G023700.1	Wheat	vacuole	23.37	26.88
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.46	25.71
HORVU3Hr1G017270.1	Barley	plastid	23.91	24.04
TraesCS6B01G016300.1	Wheat	plastid	21.2	23.78
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	23.37	23.76
Os06t0285900-00	Rice	nucleus	29.89	23.61
Os06t0286146-00	Rice	nucleus	34.78	23.19
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	28.26	21.85
HORVU2Hr1G032190.3	Barley	cytosol	28.26	21.22
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	28.26	20.97
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	28.8	20.95
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	27.72	20.73
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	27.72	20.32
HORVU6Hr1G091490.1	Barley	cytosol, peroxisome, plasma membrane	21.74	17.09
TraesCS6B01G435100.1	Wheat	plastid	21.2	16.74
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	21.2	16.6
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	21.2	16.6
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	21.2	16.6
HORVU1Hr1G003560.1	Barley	cytosol, plasma membrane, vacuole	21.74	16.19
TraesCS6B01G435700.1	Wheat	plasma membrane	20.65	15.77
TraesCS6B01G435400.1	Wheat	mitochondrion	21.2	15.6
TraesCS6D01G380600.1	Wheat	peroxisome	19.02	15.42
HORVU6Hr1G091530.1	Barley	cytosol, peroxisome	20.65	15.26
TraesCS6B01G435300.1	Wheat	plasma membrane	19.02	14.77
TraesCS6B01G436000.1	Wheat	plasma membrane	19.02	14.64
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	19.02	14.46
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	20.65	14.39
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	17.93	14.16
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	17.93	13.98
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	17.39	12.96
HORVU6Hr1G091460.3	Barley	plasma membrane	17.93	12.74
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	21.2	10.92
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	28.8	8.67
TraesCS6B01G436200.1	Wheat	cytosol	15.22	8.56
Os06t0293100-00	Rice	cytosol	21.2	7.94
Os06t0294400-00	Rice	plasma membrane	25.54	7.31
Os11t0682000-01	Rice	plasma membrane	24.46	7.21
Os06t0295000-01	Rice	cytosol, peroxisome, plasma membrane	16.85	7.14
Os06t0296700-01	Rice	plasma membrane	32.61	7.05
Os06t0293500-01	Rice	plasma membrane	32.61	7.01
Os06t0296100-00	Rice	plasma membrane	30.43	6.39
Os06t0294000-01	Rice	plasma membrane	31.52	6.32
Os06t0297400-03	Rice	plasma membrane	32.07	6.1
Os11t0220500-00	Rice	plasma membrane	26.63	5.78
Os11t0144900-01	Rice	plasma membrane	27.72	5.76
Os06t0292100-00	Rice	plasma membrane	26.63	5.27
Os06t0296900-00	Rice	plasma membrane	25.54	4.92
Os06t0291800-00	Rice	plasma membrane	25.0	4.07
Os06t0292400-00	Rice	plasma membrane	25.54	3.86
Os11t0220600-00	Rice	mitochondrion, plasma membrane	2.17	1.45
Os06t0293000-00	Rice	vacuole	1.09	0.7
Os12t0141000-01	Rice	plasma membrane	0.54	0.43
Os06t0294200-01	Rice	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.2	EntrezGene:9271137	EMBL:AK241564	UniProt:B7F8V8	ProteinID:BAH92494.1	ProteinID:BAS87892.1
ProteinID:EEE60498.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os04g0168400	EnsemblPlants:Os04t0168400-01
PFAM:PF13962	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	TMHMM:TMhelix	UniParc:UPI000188AF87
RefSeq:XP_015635346.1	SEG:seg	:	:	:	:

Description

Similar to Embryogenesis transmembrane protein. (Os04t0168400-01)

Coordinates

chr4:+:4690898..4692354

Molecular Weight (calculated)

19621.7 Da

IEP (calculated)

8.039

GRAVY (calculated)

0.357

Length

184 amino acids

Sequence
(BLAST)

001: MAGEQGSAMA NRGGRANRKE GEDELRGWLM LLATLTASIT YAAALNPPGG VWQADDAAKD FVAGYPVLLD KSPWRYYVFY YCNATSFASS VCIIVLLATN
101: FYLSHTSVMV FNVLVALDMA SLGAAFVAGS SSSKRFTAFN AGLMVCLVVL FLLWKLKFLM GNDQAGQNPA SGGVANLQHG NSAL

Best Arabidopsis Sequence Match ( AT4G13266.1 )
(BLAST)

001: MEVNTRLTRE EHPFQDSSAW FLRYLDHQGD WLEKTRGNLV VAATVIAAMS FGVMVNPPGG VWQSEDCSSK GQTTFQTRTC EGKLGTSILE HNPSKRIFYL
101: GMVISNLVSF SASMGIIFLV IIGFRFRNRL IMTIMVMFMV VAVLCISAAF FFAAGLVQHE DDFIEKILQI YLGFWVLLPV LVILIQLVRF LWWVIRFICC
201: GCGRRPRSTP RLLPLALPPV R

Arabidopsis Description

Ankyrin repeat protein [Source:UniProtKB/TrEMBL;Acc:Q1PE85]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.