Factsheet for TraesCS3D01G540400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	36.59	49.72
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	48.37	47.98
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	47.56	46.25
Os04t0168400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	20.73	27.72
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	22.36	19.3
TraesCS6D01G380600.1	Wheat	peroxisome	14.23	15.42
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	12.6	13.3
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	12.6	13.19
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	6.91	9.6
TraesCS7D01G218900.1	Wheat	peroxisome	30.08	8.7
TraesCS7D01G219100.1	Wheat	peroxisome	29.27	8.35
TraesCS3D01G466700.1	Wheat	plasma membrane	29.27	8.22
TraesCS4D01G343500.2	Wheat	plasma membrane	31.3	8.2
TraesCS7D01G219200.1	Wheat	peroxisome	24.39	8.12
TraesCS7D01G219500.1	Wheat	peroxisome	28.05	8.08
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	19.11	8.05
TraesCS7D01G219000.1	Wheat	peroxisome	28.46	8.04
TraesCS5D01G140600.1	Wheat	plasma membrane	28.05	7.95
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	28.05	7.89
TraesCS7D01G091400.1	Wheat	plasma membrane	30.89	7.88
TraesCS6D01G346600.1	Wheat	plasma membrane	26.83	7.73
TraesCS7D01G218700.1	Wheat	plasma membrane	29.27	7.72
TraesCS7D01G147300.1	Wheat	plasma membrane	27.24	7.68
TraesCS4D01G348800.1	Wheat	plasma membrane	26.42	7.54
TraesCS6D01G346400.1	Wheat	plasma membrane	27.24	7.54
TraesCS6D01G337000.1	Wheat	plasma membrane	27.64	7.52
TraesCS7D01G219400.1	Wheat	peroxisome	29.27	7.48
TraesCS7D01G218600.1	Wheat	plasma membrane	27.24	7.4
TraesCS2D01G040400.1	Wheat	plasma membrane	26.83	7.29
TraesCS7D01G034700.1	Wheat	plasma membrane	28.05	7.2
TraesCS6D01G346500.2	Wheat	plasma membrane	26.83	7.15
TraesCS7D01G035200.1	Wheat	plasma membrane	27.24	7.05
TraesCS7D01G034500.1	Wheat	plasma membrane	27.24	7.05
TraesCS6D01G346300.1	Wheat	plasma membrane	20.33	6.82
TraesCS7D01G034600.1	Wheat	plasma membrane	27.64	6.81
TraesCS7D01G128400.1	Wheat	mitochondrion	28.05	6.78
TraesCS7D01G219600.1	Wheat	plasma membrane	21.54	6.69
TraesCS2D01G482300.1	Wheat	plasma membrane	28.05	6.61
TraesCS7D01G218100.1	Wheat	plasma membrane	28.86	5.67
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	26.02	5.37
TraesCS7D01G218300.1	Wheat	plasma membrane	22.36	4.9
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	21.54	4.79
TraesCS2D01G040500.1	Wheat	plasma membrane	7.72	4.03
TraesCS6D01G347000.1	Wheat	plasma membrane	1.63	1.71

Protein Annotations

EnsemblPlants:TraesCS3D01G540400.1	EnsemblPlantsGene:TraesCS3D01G540400	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF15	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3D:-:611745826..611746798

Molecular Weight (calculated)

26270.3 Da

IEP (calculated)

6.942

GRAVY (calculated)

0.432

Length

246 amino acids

Sequence
(BLAST)

001: MAAVAADPPA HAQQHQRNEE EAGIVTVSMP PDDPAPAPDP PLLLQIPTAA ASSLPKGVVH VLVVHSTGAP TAGLQAVLVP AASCNGNAPV PDPIPPARDW
101: ELRGWLMVLA TLIASITYAS GLSPPGGFQV KEVRTLGTAS TKNQQQQFMP VLLEVNSFRY MMFYYANTLA FALSLSIIML LASQDVRKLA KTKALKILVA
201: LDVLALWVAY ICGSSFNGIT QMVSLAIVFV LLLALTIRGK YFWDEV

Best Arabidopsis Sequence Match ( AT5G54710.2 )
(BLAST)

001: MKIIDLCPSL VSVTNVDGNT PLHLAAEIGN ESILWKMLRC GRADCMKINK QGQTAFILAC LNNHLDAALT LVENMRSMTM VELDAAFTGQ QPVIIDKMLE
101: KFPSLVLDVD EEQSTLLHKA VTQRNEEYAT KVIDLCPSLV SVTNVDGNTP LHLAAEIGNI NILWKMLETG EAECMKINKQ GQTAFILACL NNNVNSARIL
201: VEGTSSMTMV ELNAAFSEQQ QVIIDSILEK FPNLILDADE EQSTLLHKAC KSGNLEMART LLDVDVNQEI AEKVDKDGLT PLHRAVINGS VEILKEFLCK
301: APSSFNITTQ GTIETVFHLA AKYQKTKAFI FMAQSANIRQ LLYSLDAEDN TVLHVAASVD STSLVRHILS ETTIDVTLKN KKGFAAVDLI DKEGVDFPLL
401: SLWFRDEAEK IQRPARYVKF AHEPVELIRN TNNGEKLSSE SRAMDLLREG RDPRNKEREM HSESLQNARN TITIVAVLIA SVAFTCGINP PGGVHQDGPF
501: IGKATAGRTL AFKIFSVANN IALFTSLSIV TLLVSIISYR TKALKMCVVI AHKMMWLAVA SMATAYAASA WITVPHNEGS KWLVYTTSAI ASVALGSMFV
601: YVSFMMVKHI LKKDKLRRNQ SHGKTPSTTL DMEAAGDVGC YWF

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT5G54710]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.