Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 6
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G346900.1 | Wheat | mitochondrion, plasma membrane | 80.77 | 32.36 |
| Zm00001d012387_P001 | Maize | plasma membrane | 55.13 | 24.43 |
| TraesCS6D01G346300.1 | Wheat | plasma membrane | 71.79 | 22.92 |
| Os06t0295300-00 | Rice | golgi, mitochondrion, nucleus, plasma membrane | 52.56 | 20.13 |
| TraesCS2D01G040500.1 | Wheat | plasma membrane | 39.32 | 19.49 |
| TraesCS6D01G346500.2 | Wheat | plasma membrane | 73.08 | 18.53 |
| TraesCS6D01G346400.1 | Wheat | plasma membrane | 69.66 | 18.34 |
| TraesCS6D01G346600.1 | Wheat | plasma membrane | 66.24 | 18.15 |
| TraesCS6D01G346800.1 | Wheat | nucleus, peroxisome, plasma membrane | 65.81 | 17.62 |
| TraesCS7D01G147300.1 | Wheat | plasma membrane | 61.54 | 16.51 |
| TraesCS7D01G218900.1 | Wheat | peroxisome | 55.56 | 15.28 |
| TraesCS7D01G219000.1 | Wheat | peroxisome | 55.56 | 14.93 |
| TraesCS7D01G219100.1 | Wheat | peroxisome | 54.27 | 14.73 |
| Os06t0296700-01 | Rice | plasma membrane | 52.14 | 14.34 |
| Zm00001d028649_P001 | Maize | plasma membrane | 51.28 | 13.27 |
| TraesCS7D01G218700.1 | Wheat | plasma membrane | 44.02 | 11.04 |
| TraesCS7D01G218600.1 | Wheat | plasma membrane | 42.31 | 10.94 |
| TraesCS7D01G034700.1 | Wheat | plasma membrane | 43.59 | 10.65 |
| TraesCS7D01G034500.1 | Wheat | plasma membrane | 43.16 | 10.62 |
| TraesCS3D01G466700.1 | Wheat | plasma membrane | 39.74 | 10.62 |
| TraesCS2D01G040400.1 | Wheat | plasma membrane | 40.6 | 10.5 |
| TraesCS7D01G035200.1 | Wheat | plasma membrane | 42.31 | 10.42 |
| TraesCS6D01G337000.1 | Wheat | plasma membrane | 40.17 | 10.4 |
| Os06t0296100-00 | Rice | plasma membrane | 38.03 | 10.15 |
| TraesCS7D01G034600.1 | Wheat | plasma membrane | 41.45 | 9.72 |
| TraesCS4D01G343500.2 | Wheat | plasma membrane | 38.46 | 9.58 |
| TraesCS7D01G091400.1 | Wheat | plasma membrane | 39.32 | 9.53 |
| TraesCS5D01G140600.1 | Wheat | plasma membrane | 33.33 | 8.99 |
| TraesCS6B01G397100.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 23.5 | 8.9 |
| TraesCS7D01G128400.1 | Wheat | mitochondrion | 38.46 | 8.84 |
| TraesCS4D01G348800.1 | Wheat | plasma membrane | 32.48 | 8.82 |
| TraesCS2D01G482300.1 | Wheat | plasma membrane | 38.03 | 8.52 |
| TraesCS7D01G219600.1 | Wheat | plasma membrane | 27.78 | 8.21 |
| TraesCS7D01G219400.1 | Wheat | peroxisome | 30.77 | 7.48 |
| TraesCS7D01G219500.1 | Wheat | peroxisome | 26.92 | 7.38 |
| TraesCS7D01G218200.1 | Wheat | plasma membrane, plastid | 32.91 | 6.96 |
| TraesCS7D01G218400.1 | Wheat | nucleus, peroxisome, plasma membrane | 34.62 | 6.8 |
| TraesCS7D01G218100.1 | Wheat | plasma membrane | 33.76 | 6.3 |
| TraesCS6D01G380500.1 | Wheat | cytosol, peroxisome, plasma membrane | 5.56 | 5.53 |
| TraesCS7D01G218300.1 | Wheat | plasma membrane | 26.07 | 5.44 |
| TraesCS7D01G219200.1 | Wheat | peroxisome | 16.67 | 5.28 |
| TraesCS6D01G380600.1 | Wheat | peroxisome | 4.7 | 4.85 |
| TraesCS2D01G000400.1 | Wheat | plasma membrane, plastid | 2.99 | 3.87 |
| TraesCS7D01G216100.1 | Wheat | cytosol, peroxisome, plasma membrane | 4.7 | 3.86 |
| TraesCS2D01G180100.1 | Wheat | cytosol, peroxisome, vacuole | 2.99 | 2.82 |
| TraesCS2D01G180000.1 | Wheat | cytosol, endoplasmic reticulum, vacuole | 2.99 | 2.77 |
| TraesCS6D01G380800.1 | Wheat | cytosol, peroxisome, plasma membrane | 2.56 | 2.58 |
| TraesCS7D01G219300.1 | Wheat | extracellular, plasma membrane, plastid, vacuole | 1.28 | 1.69 |
| TraesCS3D01G540400.1 | Wheat | cytosol, peroxisome, plasma membrane | 1.71 | 1.63 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G347000.1 | EnsemblPlantsGene:TraesCS6D01G347000 | InterPro:PGG_dom | ncoils:Coil | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF51 |
| PFAM:PF13962 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6D:+:445910851..445911811
Molecular Weight (calculated)
26135.0 Da
IEP (calculated)
6.352
GRAVY (calculated)
0.162
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSISLIILL VNPNLYRPAI RSNALSVCMA VGLFCLMGAY AAGSTQRLKT SIYIFVLVGV VLLVVVGLLL VCLLREQNND GSSAAVGPSI SHEQKHEEEE
101: ERKEDEEEMK NHARRKYLML LGVLVASVAY QVGLEPPGGA WQSSGNGYEA GDPVMHDNRR PQYLVFFYSN SFSFVASIVV IMMLLPHWLP NNKEEEWEKW
201: SLRVLNWTIL LDLVTQWPMQ PAPAGGGRRL CMSV
101: ERKEDEEEMK NHARRKYLML LGVLVASVAY QVGLEPPGGA WQSSGNGYEA GDPVMHDNRR PQYLVFFYSN SFSFVASIVV IMMLLPHWLP NNKEEEWEKW
201: SLRVLNWTIL LDLVTQWPMQ PAPAGGGRRL CMSV
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.