Factsheet for TraesCS6D01G346500.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G398100.1	Wheat	plasma membrane	96.21	95.79
TraesCS6B01G396900.1	Wheat	plasma membrane	95.34	94.73
HORVU6Hr1G086440.7	Barley	golgi, plasma membrane	90.9	89.83
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	50.92	80.48
TraesCS6D01G346400.1	Wheat	plasma membrane	71.72	74.47
TraesCS6D01G347000.1	Wheat	plasma membrane	18.53	73.08
TraesCS6D01G346600.1	Wheat	plasma membrane	65.98	71.31
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	66.52	70.25
TraesCS6D01G346300.1	Wheat	plasma membrane	55.25	69.58
TraesCS7D01G147300.1	Wheat	plasma membrane	57.85	61.24
TraesCS7D01G218900.1	Wheat	peroxisome	53.52	58.05
TraesCS7D01G219100.1	Wheat	peroxisome	53.74	57.54
TraesCS7D01G219000.1	Wheat	peroxisome	54.28	57.52
Zm00001d012387_P001	Maize	plasma membrane	32.83	57.39
Zm00001d028649_P001	Maize	plasma membrane	53.3	54.42
Os06t0296700-01	Rice	plasma membrane	49.84	54.05
TraesCS3D01G466700.1	Wheat	plasma membrane	45.18	47.6
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	30.88	46.64
Os06t0296100-00	Rice	plasma membrane	44.31	46.64
TraesCS7D01G218700.1	Wheat	plasma membrane	46.91	46.41
TraesCS7D01G218600.1	Wheat	plasma membrane	45.4	46.3
TraesCS6D01G337000.1	Wheat	plasma membrane	41.6	42.48
TraesCS7D01G035200.1	Wheat	plasma membrane	43.34	42.11
TraesCS7D01G219200.1	Wheat	peroxisome	33.48	41.81
TraesCS7D01G034500.1	Wheat	plasma membrane	42.8	41.54
TraesCS2D01G040400.1	Wheat	plasma membrane	40.3	41.1
TraesCS7D01G034700.1	Wheat	plasma membrane	42.36	40.81
TraesCS7D01G034600.1	Wheat	plasma membrane	43.01	39.78
TraesCS5D01G140600.1	Wheat	plasma membrane	37.16	39.52
TraesCS2D01G040500.1	Wheat	plasma membrane	19.83	38.77
TraesCS4D01G348800.1	Wheat	plasma membrane	35.75	38.28
TraesCS4D01G343500.2	Wheat	plasma membrane	38.89	38.23
TraesCS7D01G091400.1	Wheat	plasma membrane	39.76	38.03
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	7.26	37.85
TraesCS2D01G482300.1	Wheat	plasma membrane	39.76	35.15
TraesCS7D01G128400.1	Wheat	mitochondrion	38.35	34.77
TraesCS7D01G219600.1	Wheat	plasma membrane	29.79	34.72
TraesCS7D01G219400.1	Wheat	peroxisome	35.86	34.37
TraesCS7D01G219500.1	Wheat	peroxisome	30.77	33.26
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.07	30.94
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	8.02	29.84
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.13	29.64
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	8.78	28.42
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	7.04	27.66
TraesCS7D01G218300.1	Wheat	plasma membrane	33.26	27.36
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	32.5	27.1
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	7.15	26.83
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	34.24	26.53
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	6.61	26.18
TraesCS7D01G218100.1	Wheat	plasma membrane	34.02	25.06
TraesCS6D01G380600.1	Wheat	peroxisome	5.63	22.91

Protein Annotations

EnsemblPlants:TraesCS6D01G346500.2	EnsemblPlantsGene:TraesCS6D01G346500	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:-:445817944..445820867

Molecular Weight (calculated)

101021.0 Da

IEP (calculated)

9.021

GRAVY (calculated)

0.182

Length

923 amino acids

Sequence
(BLAST)

001: MDQPVQPWEY SLRKYLLLLA TLVVTVTYAA GFNPPGGVWQ NALGGRLAGD PIIRDTNYHR YLAFFYCNAT AFAASLVVIV LILVLAIRHD KKGKDSRWVV
101: VPLRLVMVLD LLSLMGAYGA GTCRDKISTV YSAVLVAIVF LYILVLKSMD CWDKNSDPGA GSGRGMPVAN GNTGSGSGSA RPNPDSGTGT ISTSIAGSDG
201: GMPISNGNTS SGGVMCTPDP DSDAGTIPPP ILGSDPTVGE DKERLRHHKA HKKLKAEERL RKVLMLLATF AVSITYVAGL STPGGFWDST QGSHHPGDAV
301: LKDNHGPRLT VFLLCNTTAF VASLLITMLL IIDGKKLRKK KTARSRMLYG CIVVALVGLV AAYIAGSCRE IDTTAYVFSL VGAVLAMAHI ILLYGIYASS
401: RSSPVQQTGE VQQTVDNVSG RKALDKARSL VLLLATLAAA ITYTAGLDPP GGLWQDNSNG HMAGDPILLT TNARRYKAFF YCNSVAFVAS LVAIVLVQTD
501: ILVRHHVLEA AMILDLFGLI GAYAAGSCRD VKTSIYAIAL AGAVLVYVVI HIVFFTLDHE DKKDDDKANQ LLEKRRKRLL LFAILAATIT YQAGLTPPGG
601: FLLQDDKLGH HAGDPVLLFN YPLRYKVFFY CNSVSFMLSI SLTILLVNHN LYRPAIRSNA LFVCMVVGLL CLMVAYAAGS TQHLKTSIYI FLLVGAALLV
701: AAGLLLVFLL KKNDSDSAAQ HTEQNQEMKE LEVRNGDKEE REEAEEKNGD KELRKKEVEE NKEERKKHER RKYLMLLGIL VASVAYQAGL KPPGGAWQSS
801: ENGYEAGDPV MHDNRRPRYL IFFYSNSFSF MASIVVIMML LPHWLPNKNK EEWEKWSLRV MNWTILLDLF TLLVSYAAGS NRQWKTSVYV IALIFAVLVY
901: FAIHMTLSCT VCRPKSPQSS SEV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.