Factsheet for TraesCS4D01G348800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G358400.1	Wheat	plasma membrane	68.21	68.29
Os06t0293000-00	Rice	vacuole	17.17	51.75
TraesCS4D01G343500.2	Wheat	plasma membrane	50.35	46.22
Os06t0293100-00	Rice	cytosol	26.22	46.03
TraesCS7D01G091400.1	Wheat	plasma membrane	48.14	43.01
TraesCS2D01G482300.1	Wheat	plasma membrane	49.19	40.61
TraesCS7D01G128400.1	Wheat	mitochondrion	47.22	39.98
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	25.99	38.36
TraesCS5D01G140600.1	Wheat	plasma membrane	38.05	37.79
TraesCS7D01G218900.1	Wheat	peroxisome	37.12	37.6
TraesCS6D01G346600.1	Wheat	plasma membrane	37.12	37.47
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	37.82	37.3
TraesCS7D01G218600.1	Wheat	plasma membrane	38.75	36.91
TraesCS7D01G147300.1	Wheat	plasma membrane	36.89	36.47
TraesCS7D01G219100.1	Wheat	peroxisome	36.31	36.31
TraesCS6D01G346400.1	Wheat	plasma membrane	37.35	36.22
TraesCS3D01G466700.1	Wheat	plasma membrane	36.54	35.96
TraesCS6D01G346500.2	Wheat	plasma membrane	38.28	35.75
TraesCS7D01G219000.1	Wheat	peroxisome	35.96	35.59
TraesCS7D01G218700.1	Wheat	plasma membrane	38.17	35.26
TraesCS6D01G346300.1	Wheat	plasma membrane	29.58	34.79
TraesCS7D01G219400.1	Wheat	peroxisome	38.63	34.58
TraesCS7D01G219600.1	Wheat	plasma membrane	30.63	33.33
TraesCS2D01G040400.1	Wheat	plasma membrane	34.69	33.04
TraesCS7D01G034500.1	Wheat	plasma membrane	36.31	32.91
TraesCS6D01G337000.1	Wheat	plasma membrane	34.45	32.85
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.84	32.6
TraesCS6D01G347000.1	Wheat	plasma membrane	8.82	32.48
TraesCS7D01G035200.1	Wheat	plasma membrane	35.61	32.32
TraesCS7D01G219200.1	Wheat	peroxisome	27.26	31.8
TraesCS2D01G040500.1	Wheat	plasma membrane	17.4	31.78
TraesCS7D01G034700.1	Wheat	plasma membrane	34.92	31.42
TraesCS7D01G219500.1	Wheat	peroxisome	30.63	30.91
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	6.26	30.51
TraesCS7D01G034600.1	Wheat	plasma membrane	35.27	30.46
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	8.7	30.24
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.47	28.85
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	8.93	27.02
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	7.54	26.42
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	35.03	25.36
TraesCS7D01G218300.1	Wheat	plasma membrane	31.9	24.51
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	31.44	24.48
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	6.61	24.46
TraesCS7D01G218100.1	Wheat	plasma membrane	35.5	24.42
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	6.26	22.98
TraesCS6D01G380600.1	Wheat	peroxisome	5.68	21.59

Protein Annotations

EnsemblPlants:TraesCS4D01G348800.1	EnsemblPlantsGene:TraesCS4D01G348800	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF15
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr4D:+:502380565..502383307

Molecular Weight (calculated)

94316.1 Da

IEP (calculated)

9.296

GRAVY (calculated)

0.453

Length

862 amino acids

Sequence
(BLAST)

001: MDYSEEYTFV WKLRKYLLLL ATLVVSATYV AGLNPPGGLF VDDEAPHRVG DPVLASTNST RYNVFFYCNA AAFLASLVIV MVLLDQRIIG NRVGLTVLRS
101: AMVLDLVALM GAFAAGSCRD VRSSVYVPAV FAVLMAYVAI HLLVAASPLK SGHAGHSDAE EGRLKGRWKL PLLLATFVTP LTYGAGLVPP GGSWFDSSNF
201: RGQVAGDPML QRIYPLRYFF FLLCNTTCFV SSLVIITLLL SRSLSGHVAR SYALQVCVMA ELLCLMGAYA AGSPRFLAQT VHIIFLAGVM LVIIALVGKF
301: SMDTVKKWLA RRGNLEQESP HEVVHPGVPN EGDGGDVHIL VESQSLLLLL ATLIATVTYQ EGLNPPGGYW RDEDMRGFRA GHPSLLDVLP NRYSAFFHCN
401: TMAFVASLVV IVIVQSKRLL MSGAAIRLQV LQVAIVLSLF GLMGAYTAGS CRDIATTIYI SALAVANVVA FIILGSGSKR SLWVEATVYK GLKKLHLLDD
501: DHDDQAQSKR EEMHSLKKKR KSLLQLAILV ATATYQTGLN SAGGFWEVGY AFYSKKHLTD TLLLGYDPRR YLVFFYCNAA EFMASVAVIL LLVNRRLHKQ
601: SIRSNVLQAC IMIGFMALRT AYTVGSTHKV STSIYVYGLV AAVVTYLALQ FLPLLFARCV GRPTAPRLPA WLRKLFEPLS LMPDAHNTNL VQQQYTDKHI
701: KHKYMMLLAI LTASMTYQAG LVPPGGTWAE STGFHIAGDP IMFDVQYSRY AAFFYCNATS FAASVTLIVL LLQRTVSRRG APLRAMQAAM VLDLAGLLGA
801: YAAGTCWVWE QVFAYVTTLV AAVVVYVTLH VLLWRGKPAD PAAPPTTPDS SLHPVGSIVN EL

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.