Factsheet for TraesCS4D01G343500.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G387200.1	Wheat	plasma membrane	42.17	75.0
TraesCS5A01G551500.1	Wheat	plasma membrane	75.08	74.76
TraesCSU01G126000.1	Wheat	plasma membrane	74.97	71.62
TraesCS2D01G482300.1	Wheat	plasma membrane	69.65	62.64
TraesCS7D01G091400.1	Wheat	plasma membrane	64.0	62.28
Os06t0293000-00	Rice	vacuole	18.1	59.44
TraesCS7D01G128400.1	Wheat	mitochondrion	64.0	59.04
Os06t0293100-00	Rice	cytosol	30.24	57.84
TraesCS4D01G348800.1	Wheat	plasma membrane	46.22	50.35
TraesCS5D01G140600.1	Wheat	plasma membrane	39.62	42.86
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	26.62	42.81
TraesCS7D01G218600.1	Wheat	plasma membrane	40.58	42.1
TraesCS3D01G466700.1	Wheat	plasma membrane	38.87	41.67
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	38.55	41.42
TraesCS7D01G219000.1	Wheat	peroxisome	38.13	41.1
TraesCS6D01G346600.1	Wheat	plasma membrane	37.38	41.1
TraesCS7D01G218900.1	Wheat	peroxisome	37.06	40.89
TraesCS7D01G219100.1	Wheat	peroxisome	37.17	40.49
TraesCS7D01G218700.1	Wheat	plasma membrane	40.15	40.41
TraesCS7D01G147300.1	Wheat	plasma membrane	37.17	40.02
TraesCS6D01G346400.1	Wheat	plasma membrane	37.27	39.37
TraesCS6D01G346500.2	Wheat	plasma membrane	38.23	38.89
TraesCS6D01G346300.1	Wheat	plasma membrane	30.35	38.88
TraesCS6D01G347000.1	Wheat	plasma membrane	9.58	38.46
TraesCS7D01G219400.1	Wheat	peroxisome	39.4	38.42
TraesCS7D01G219200.1	Wheat	peroxisome	29.71	37.75
TraesCS7D01G219600.1	Wheat	plasma membrane	31.84	37.75
TraesCS2D01G040500.1	Wheat	plasma membrane	18.85	37.5
TraesCS2D01G040400.1	Wheat	plasma membrane	36.1	37.46
TraesCS6D01G337000.1	Wheat	plasma membrane	35.89	37.28
TraesCS7D01G035200.1	Wheat	plasma membrane	36.53	36.11
TraesCS7D01G034500.1	Wheat	plasma membrane	36.32	35.86
TraesCS7D01G034700.1	Wheat	plasma membrane	36.1	35.39
TraesCS7D01G219500.1	Wheat	peroxisome	31.63	34.78
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	6.5	34.46
TraesCS7D01G034600.1	Wheat	plasma membrane	36.21	34.07
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.5	33.7
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	8.2	31.3
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	9.27	30.53
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.2	30.43
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	7.99	30.24
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	7.45	29.79
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	35.57	28.04
TraesCS7D01G218300.1	Wheat	plasma membrane	33.44	27.99
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	6.92	27.9
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	32.16	27.28
TraesCS7D01G218100.1	Wheat	plasma membrane	36.32	27.21
TraesCS6D01G380600.1	Wheat	peroxisome	6.39	26.43

Protein Annotations

EnsemblPlants:TraesCS4D01G343500.2	EnsemblPlantsGene:TraesCS4D01G343500	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF15	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4D:-:499457383..499460440

Molecular Weight (calculated)

101570.0 Da

IEP (calculated)

9.582

GRAVY (calculated)

0.268

Length

939 amino acids

Sequence
(BLAST)

001: MATEPTEDIE FLWKWRKYLL LLATLVASVT YVAGLNPPGG IRSEDGGNEP EYRAGAVHPH PPAPAAPAPA VYPFRVGDPV LVHTYSRRYT AFFYSNATAF
101: VASLVVIMFL LDRRISGNRV GLTVLRSAML LDLLALMAAF AAGSCRNVFA SIYVSALFGL VFAYVAVHVY AETRGKKIPV DSCAWRSPEE EKRLKERRKF
201: LLLLATFATP LTYGAGLAPP GGFWSETRPG HRAGAPLLHD GPYKIRYHAF FYANANSFVA SLAIIMLLAS SYALPVCVLV ELLGLMAAYA AGSCRWITTT
301: VYIIFLVGAV FLYILLQVVI AGHTKGMFTK CRRRICRILT CADLPPPDTE KNQPPPEPDT LPENAIVNAP QEQGGETGTS DAGIAKPGEN VEESRSLLLL
401: LATLAATVTY QAGLSPPGGV WPEGRPGHTA GNPVLHDMDP KRYKAFYHCN TAAFVASLVV IVIVQSKELS SGAVVRRAAL NTVMILDLFG LMGAYVAGSC
501: RDTTTTIYVA ALAVAVFVYS IAKVVAFSAK RRQIKLVQWV QSLSMKVAGC LNLSQPGSGN PDDLERKRKF LLQLAILAAT VTYQTGLNPP GGFWTKSNGN
601: KLVTAGDPIL LDYYGVRFFY CNATGFMASV AVILLLVNQT LSKGGIRSNA LHVCIMTGLL GLMGAYAAGS CRKLRTSIYV FALVAAVVAF LFLQIIIYVS
701: AHRVRSSELP WVPKWSLFET LSTGPGGGGR KNKSKEITAE DKRESERYLK RKYLMLLGIL AASVTYQAGL APPGGTWGDD DTPSLSPSSS PSAHPPTVAG
801: NPILLDFNAA RYQAFFYCNA TSFVASVVVI LLLLQRTVKK QQPGAPLRTL QTAVVLDLLG LLGAYAVGSC RDWETSAYVI ALVAVVVVFI ALHVLLSFDI
901: VFNKARKLLP RKYFGGGNDV EAQPRNPDQA SRHDSMENA

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.