Factsheet for TraesCS6D01G346800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, peroxisome

Predictor Summary:

peroxisome 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G363400.1	Wheat	peroxisome	94.51	92.6
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	47.83	71.58
TraesCS6D01G346400.1	Wheat	plasma membrane	71.85	70.64
TraesCS6D01G346600.1	Wheat	plasma membrane	67.85	69.44
TraesCS6D01G346300.1	Wheat	plasma membrane	55.95	66.71
TraesCS6D01G346500.2	Wheat	plasma membrane	70.25	66.52
TraesCS6D01G347000.1	Wheat	plasma membrane	17.62	65.81
TraesCS7D01G147300.1	Wheat	plasma membrane	61.56	61.7
TraesCS7D01G218900.1	Wheat	peroxisome	56.98	58.52
TraesCS7D01G219100.1	Wheat	peroxisome	57.55	58.35
TraesCS7D01G219000.1	Wheat	peroxisome	57.55	57.75
Zm00001d012387_P001	Maize	plasma membrane	34.78	57.58
Zm00001d028649_P001	Maize	plasma membrane	54.92	53.1
Os06t0296700-01	Rice	plasma membrane	50.23	51.59
TraesCS3D01G466700.1	Wheat	plasma membrane	47.03	46.92
TraesCS7D01G218600.1	Wheat	plasma membrane	47.6	45.97
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	31.69	45.34
Os06t0296100-00	Rice	plasma membrane	44.97	44.81
TraesCS7D01G218700.1	Wheat	plasma membrane	47.83	44.8
TraesCS7D01G219200.1	Wheat	peroxisome	36.27	42.9
TraesCS6D01G337000.1	Wheat	plasma membrane	44.28	42.81
TraesCS2D01G040400.1	Wheat	plasma membrane	42.45	40.99
TraesCS7D01G035200.1	Wheat	plasma membrane	44.39	40.84
TraesCS7D01G034500.1	Wheat	plasma membrane	44.39	40.8
TraesCS7D01G034700.1	Wheat	plasma membrane	43.59	39.77
TraesCS5D01G140600.1	Wheat	plasma membrane	39.47	39.75
TraesCS2D01G040500.1	Wheat	plasma membrane	21.28	39.41
TraesCS7D01G034600.1	Wheat	plasma membrane	44.28	38.78
TraesCS4D01G343500.2	Wheat	plasma membrane	41.42	38.55
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	7.67	37.85
TraesCS4D01G348800.1	Wheat	plasma membrane	37.3	37.82
TraesCS7D01G091400.1	Wheat	plasma membrane	41.19	37.31
TraesCS7D01G128400.1	Wheat	mitochondrion	41.3	35.46
TraesCS2D01G482300.1	Wheat	plasma membrane	41.99	35.15
TraesCS7D01G219600.1	Wheat	plasma membrane	31.35	34.6
TraesCS7D01G219400.1	Wheat	peroxisome	37.76	34.27
TraesCS7D01G219500.1	Wheat	peroxisome	31.69	32.44
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.52	31.49
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	8.35	29.44
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	7.89	29.36
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.35	28.85
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	9.38	28.77
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	7.89	28.05
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	36.96	27.12
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	7.21	27.04
TraesCS7D01G218300.1	Wheat	plasma membrane	34.55	26.92
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	32.72	25.84
TraesCS7D01G218100.1	Wheat	plasma membrane	36.84	25.7
TraesCS6D01G380600.1	Wheat	peroxisome	6.18	23.79

Protein Annotations

EnsemblPlants:TraesCS6D01G346800.1	EnsemblPlantsGene:TraesCS6D01G346800	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:+:445852115..445854860

Molecular Weight (calculated)

96238.4 Da

IEP (calculated)

9.283

GRAVY (calculated)

0.257

Length

874 amino acids

Sequence
(BLAST)

001: MDPGHVQPGP PPPAMDPGHV QPGPPPPAMD PGHVQPGPPP PVTDLDDVQP GPPQRWEYSL RKYLLLLATL VVTVTYAAGF NPPGGVWQAA HDGQPAGDPI
101: IRYTYYHRYL AFFYCNATAF AASLVVIVLI LILAIRHDKD EKDTLWVVVP LRLFMMLDLL SLMGAYGAGT CTCQDKVSTI YYAVLVAAVL LYVTVLKLVD
201: RCWKMPATNL DSSVPDSDLE VEAKEKQARE KKAEERLCKV LMLLAIFAVS ITYVAGVNTP GGFWDSTGGS HHLGDAILKD HHNIRLTVFL FCNTMAFVAS
301: LFITMLLIID GKNLHKKKAR SRMLYGCIVV ALVGLVGAYA AGSCRETDTT VYVLSLVGAV VAYILLHRFC SSASRLFSRC FSPDENEDTD ENNVSAREAL
401: DKARSLVLLL ATLAAAITYA AGLDPPGGLW QDNSNGHMAG DPILLTTNLA RYRAFYYCNS VAFVASLVAI VLVQKEKLVK HHALEAAMIL VLFGLIGAYA
501: AGSCRDVNKS IYAMALAGAV LIYVVIHIVF FTLDHKDKKD DAREDLLLEK RRKRLLLFAI LAATITYQAG LTPPGGFLLQ DDKLGRHHAG DPVLLDNYPR
601: RYNAFFYCNS ISFMLSIALI ILLVNPNLYR PAIRSNALSV CTAVGLLCLM GAYATGSTQH LKTSIYIIVL AVVVLLVAAG LLLVFLLKRH GNSKKNPPSA
701: PIKQKDQKGE RKKHARRKYL MLLGILVASV AYQAGLKPPG GTWQSSDSGY EAGNPVMHDN RRPRYLVFFY SNSISFVASI VVIIMLLPQW LRKEQQGEWE
801: KWSLRVMNWT IRLDLFALLG AYAAGSNRGW KTSMYVVALI IAVLGYFVIH MKISTCLERR RKKRDAEAAM GIIV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.