Subcellular Localization
min:
: max
Winner_takes_all: cytosol, vacuole, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G199100.1 | Wheat | plastid | 45.45 | 82.73 |
| TraesCS2D01G180100.1 | Wheat | cytosol, peroxisome, vacuole | 73.52 | 75.0 |
| TraesCS2D01G000400.1 | Wheat | plasma membrane, plastid | 41.5 | 58.01 |
| TraesCS3D01G540400.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.25 | 47.56 |
| Os04t0168400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 20.95 | 28.8 |
| TraesCS7D01G216100.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.74 | 19.3 |
| TraesCS6D01G380600.1 | Wheat | peroxisome | 14.62 | 16.3 |
| TraesCS6D01G380500.1 | Wheat | cytosol, peroxisome, plasma membrane | 13.04 | 14.04 |
| TraesCS6D01G380800.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.65 | 13.73 |
| TraesCS7D01G219300.1 | Wheat | extracellular, plasma membrane, plastid, vacuole | 9.09 | 12.99 |
| TraesCS6D01G346900.1 | Wheat | mitochondrion, plasma membrane | 22.53 | 9.76 |
| TraesCS7D01G219200.1 | Wheat | peroxisome | 26.09 | 8.93 |
| TraesCS6D01G346600.1 | Wheat | plasma membrane | 30.04 | 8.9 |
| TraesCS7D01G147300.1 | Wheat | plasma membrane | 30.04 | 8.72 |
| TraesCS7D01G218900.1 | Wheat | peroxisome | 28.85 | 8.58 |
| TraesCS6D01G346400.1 | Wheat | plasma membrane | 30.04 | 8.55 |
| TraesCS4D01G348800.1 | Wheat | plasma membrane | 28.85 | 8.47 |
| TraesCS6D01G346300.1 | Wheat | plasma membrane | 24.51 | 8.46 |
| TraesCS3D01G466700.1 | Wheat | plasma membrane | 29.25 | 8.45 |
| TraesCS7D01G218600.1 | Wheat | plasma membrane | 30.04 | 8.4 |
| TraesCS6D01G346800.1 | Wheat | nucleus, peroxisome, plasma membrane | 28.85 | 8.35 |
| TraesCS5D01G140600.1 | Wheat | plasma membrane | 28.46 | 8.29 |
| TraesCS4D01G343500.2 | Wheat | plasma membrane | 30.43 | 8.2 |
| TraesCS7D01G219000.1 | Wheat | peroxisome | 28.06 | 8.15 |
| TraesCS7D01G218700.1 | Wheat | plasma membrane | 30.04 | 8.15 |
| TraesCS6D01G346500.2 | Wheat | plasma membrane | 29.64 | 8.13 |
| TraesCS7D01G219100.1 | Wheat | peroxisome | 27.67 | 8.12 |
| TraesCS7D01G091400.1 | Wheat | plasma membrane | 30.43 | 7.98 |
| TraesCS6D01G337000.1 | Wheat | plasma membrane | 27.27 | 7.63 |
| TraesCS2D01G040400.1 | Wheat | plasma membrane | 27.27 | 7.62 |
| TraesCS7D01G219500.1 | Wheat | peroxisome | 25.69 | 7.61 |
| TraesCS7D01G034500.1 | Wheat | plasma membrane | 28.06 | 7.47 |
| TraesCS7D01G219400.1 | Wheat | peroxisome | 28.06 | 7.37 |
| TraesCS7D01G219600.1 | Wheat | plasma membrane | 22.92 | 7.32 |
| TraesCS7D01G034700.1 | Wheat | plasma membrane | 27.27 | 7.2 |
| TraesCS2D01G482300.1 | Wheat | plasma membrane | 29.64 | 7.18 |
| TraesCS7D01G128400.1 | Wheat | mitochondrion | 28.46 | 7.07 |
| TraesCS7D01G035200.1 | Wheat | plasma membrane | 26.09 | 6.95 |
| TraesCS7D01G034600.1 | Wheat | plasma membrane | 27.27 | 6.91 |
| TraesCS7D01G218400.1 | Wheat | nucleus, peroxisome, plasma membrane | 25.69 | 5.46 |
| TraesCS7D01G218100.1 | Wheat | plasma membrane | 26.09 | 5.27 |
| TraesCS2D01G040500.1 | Wheat | plasma membrane | 9.09 | 4.87 |
| TraesCS7D01G218300.1 | Wheat | plasma membrane | 21.34 | 4.81 |
| TraesCS7D01G218200.1 | Wheat | plasma membrane, plastid | 20.55 | 4.7 |
| TraesCS6D01G347000.1 | Wheat | plasma membrane | 2.77 | 2.99 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G180000.1 | EnsemblPlantsGene:TraesCS2D01G180000 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF15 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:-:124475872..124476762
Molecular Weight (calculated)
27247.0 Da
IEP (calculated)
4.859
GRAVY (calculated)
0.214
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPAIAPPTA GGGHDPPTQQ PEEEIAVRVI PASEDVEEPA ADTTSFLCPL VPLPTATLAN GMHVLLVQST STDLSPAGLQ ALLVPASCWE DGPRDHQARR
101: NNDSRKAARE LRGWLMVLAT LIASITYASG LSPPGGFQSG DSDDDRFNPA TPVLRYRSPW RYKTFYYCNT VAFALSLSTM LLVASQDLRR LAKIKVLEIM
201: VALDVLALLM AYIVGSTFGL TELGVCAGLV LIVPVALVVM SSRVCGKYFW DEL
101: NNDSRKAARE LRGWLMVLAT LIASITYASG LSPPGGFQSG DSDDDRFNPA TPVLRYRSPW RYKTFYYCNT VAFALSLSTM LLVASQDLRR LAKIKVLEIM
201: VALDVLALLM AYIVGSTFGL TELGVCAGLV LIVPVALVVM SSRVCGKYFW DEL
001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.