Factsheet for TraesCS6D01G337000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G387600.1	Wheat	plasma membrane	73.01	73.91
TraesCS6A01G354800.1	Wheat	plasma membrane	96.46	70.84
TraesCS3D01G466700.1	Wheat	plasma membrane	47.23	48.74
TraesCS7D01G218700.1	Wheat	plasma membrane	47.68	46.2
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	29.31	45.38
TraesCS6D01G346600.1	Wheat	plasma membrane	42.7	45.2
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	42.81	44.28
TraesCS7D01G218900.1	Wheat	peroxisome	40.49	43.01
TraesCS7D01G147300.1	Wheat	plasma membrane	40.93	42.43
TraesCS6D01G346300.1	Wheat	plasma membrane	34.29	42.29
TraesCS7D01G219000.1	Wheat	peroxisome	40.6	42.14
TraesCS6D01G346400.1	Wheat	plasma membrane	41.26	41.96
TraesCS7D01G219100.1	Wheat	peroxisome	39.93	41.88
TraesCS6D01G346500.2	Wheat	plasma membrane	42.48	41.6
TraesCS7D01G034700.1	Wheat	plasma membrane	44.03	41.54
TraesCS7D01G035200.1	Wheat	plasma membrane	43.58	41.47
TraesCS2D01G040400.1	Wheat	plasma membrane	41.15	41.1
TraesCS7D01G034600.1	Wheat	plasma membrane	45.13	40.88
TraesCS7D01G219200.1	Wheat	peroxisome	33.41	40.87
TraesCS7D01G034500.1	Wheat	plasma membrane	42.37	40.27
TraesCS6D01G347000.1	Wheat	plasma membrane	10.4	40.17
TraesCS7D01G218600.1	Wheat	plasma membrane	40.04	40.0
TraesCS2D01G040500.1	Wheat	plasma membrane	20.58	39.41
TraesCS5D01G140600.1	Wheat	plasma membrane	34.51	35.94
TraesCS4D01G343500.2	Wheat	plasma membrane	37.28	35.89
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	6.97	35.59
TraesCS4D01G348800.1	Wheat	plasma membrane	32.85	34.45
TraesCS7D01G091400.1	Wheat	plasma membrane	36.17	33.89
TraesCS7D01G219400.1	Wheat	peroxisome	35.07	32.92
TraesCS7D01G128400.1	Wheat	mitochondrion	37.06	32.91
TraesCS7D01G219600.1	Wheat	plasma membrane	28.32	32.32
TraesCS7D01G219500.1	Wheat	peroxisome	30.09	31.85
TraesCS2D01G482300.1	Wheat	plasma membrane	36.39	31.51
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	5.97	29.83
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	7.96	29.03
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	9.07	28.77
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	7.3	28.09
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	7.52	27.64
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	7.63	27.27
TraesCS6D01G380600.1	Wheat	peroxisome	6.42	25.55
TraesCS7D01G218300.1	Wheat	plasma membrane	31.53	25.4
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	6.53	25.32
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	33.3	25.27
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	30.64	25.02
TraesCS7D01G218100.1	Wheat	plasma membrane	33.74	24.34

Protein Annotations

EnsemblPlants:TraesCS6D01G337000.1	EnsemblPlantsGene:TraesCS6D01G337000	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:-:437781542..437786916

Molecular Weight (calculated)

98211.8 Da

IEP (calculated)

8.125

GRAVY (calculated)

0.289

Length

904 amino acids

Sequence
(BLAST)

001: MAMASADENG AGNHNKNTDS LKASTEFQLK KYLLLLATLV ATVTYVAGLN LPGGSWTEDT PGGQVAGEPI LRETYYYRYI VFYYCNAISF AASLVVSLLL
101: LVLHKGGNYH HLLRPIMVID LFGLMGAYAA GSSRDKFTTV CAAVMVAGLA AYVTVAFLWY VLRRATGGTA ANKKEESPDQ EAAALAEHEI LMVLAIFVAT
201: VAYVAAMNPP GGFWRSTQEG HHTGGDPILQ GGHSGRYKFF FFFNTTAFVT SLLAIMLILD YKKLNISSDR FGVGRCGLYV SLVIAVGGLG GAYAAGSCRN
301: LESTAIVLSL GPAVLIYIAL QAIAGVSTDK LPCIGRMCSY PRKWLTVITR FVTDSTCTSR PPPPLTDEKE KDKILKRQRD ENEKLNKARE FIQLLAILAA
401: TITYQAGLDP PGGLWLESGE GHTVGDSILL TTHPIRYKAF FYSNSVAFVA SLVIIVMLQS ERLVRLHILE ATMILDLFSL MGAYAAGSSR DTSTSIYIVA
501: MAGAVLIYVV IHIVFFTLDP EDMDTDVLDK CREVLLLLAI LAASITYQAG LTPPGGFWEV DDEKHGHHAG FSILQDKYHL RYKAFFYCNA ASFMASVALI
601: ILLVNPTLYK PAIECYALFV CMVGGMFGLM GAYAAGSSLH LRASIIILVL VALVFGFVVY LVLTGSHKLK RKEPAGQGEP QGGHVTDDAA KDQNQPGQGV
701: QGHHVADNAA KDQIQPAQGV QGDHVADHAA KHQKQPAEGN NVADNNKAIY LMLLGILSAS VTYLTGLKPP GGLWRDDNNG HSAGSPVLYD MDRRRYMVYF
801: YSNSISFMAS IIVIALLLLL PLLGYKSDHC SLHTVMVLDM LALLVAYAAG SARKWGTFWK VILLLLPTVI FLRLLFWCKN KYRSTAKPKP GVIAAPNQEA
901: TATQ

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.