Factsheet for TraesCS6D01G346300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	59.21	74.32
TraesCS6B01G398300.1	Wheat	plasma membrane	88.27	73.44
TraesCS6D01G347000.1	Wheat	plasma membrane	22.92	71.79
TraesCS6A01G363100.2	Wheat	plasma membrane	84.17	65.78
Zm00001d012387_P001	Maize	plasma membrane	41.75	57.95
TraesCS6D01G346600.1	Wheat	plasma membrane	66.98	57.49
TraesCS6D01G346400.1	Wheat	plasma membrane	68.62	56.58
TraesCS6D01G346800.1	Wheat	nucleus, peroxisome, plasma membrane	66.71	55.95
TraesCS6D01G346500.2	Wheat	plasma membrane	69.58	55.25
TraesCS7D01G147300.1	Wheat	plasma membrane	60.71	51.03
TraesCS7D01G218900.1	Wheat	peroxisome	56.89	49.0
TraesCS7D01G219100.1	Wheat	peroxisome	56.07	47.68
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	39.56	47.46
TraesCS7D01G219000.1	Wheat	peroxisome	55.93	47.07
Zm00001d028649_P001	Maize	plasma membrane	53.75	43.58
Os06t0296700-01	Rice	plasma membrane	49.8	42.89
TraesCS2D01G040500.1	Wheat	plasma membrane	24.83	38.56
TraesCS3D01G466700.1	Wheat	plasma membrane	45.16	37.79
TraesCS7D01G218600.1	Wheat	plasma membrane	46.52	37.68
Os06t0296100-00	Rice	plasma membrane	44.47	37.17
TraesCS7D01G218700.1	Wheat	plasma membrane	45.57	35.8
TraesCS6D01G337000.1	Wheat	plasma membrane	42.29	34.29
TraesCS7D01G035200.1	Wheat	plasma membrane	43.66	33.68
TraesCS7D01G219600.1	Wheat	plasma membrane	34.79	32.2
TraesCS2D01G040400.1	Wheat	plasma membrane	39.7	32.15
TraesCS7D01G034500.1	Wheat	plasma membrane	41.61	32.07
TraesCS7D01G034700.1	Wheat	plasma membrane	41.88	32.05
TraesCS7D01G034600.1	Wheat	plasma membrane	43.11	31.66
TraesCS7D01G219200.1	Wheat	peroxisome	31.51	31.26
TraesCS5D01G140600.1	Wheat	plasma membrane	36.7	30.99
TraesCS4D01G343500.2	Wheat	plasma membrane	38.88	30.35
TraesCS7D01G091400.1	Wheat	plasma membrane	39.29	29.84
TraesCS4D01G348800.1	Wheat	plasma membrane	34.79	29.58
TraesCS7D01G128400.1	Wheat	mitochondrion	39.7	28.59
TraesCS2D01G000400.1	Wheat	plasma membrane, plastid	6.96	28.18
TraesCS2D01G482300.1	Wheat	plasma membrane	40.11	28.16
TraesCS6D01G380500.1	Wheat	cytosol, peroxisome, plasma membrane	8.73	27.23
TraesCS7D01G219500.1	Wheat	peroxisome	30.56	26.23
TraesCS6D01G380800.1	Wheat	cytosol, peroxisome, plasma membrane	8.32	26.18
TraesCS7D01G219400.1	Wheat	peroxisome	34.38	26.17
TraesCS2D01G180100.1	Wheat	cytosol, peroxisome, vacuole	8.46	25.0
TraesCS2D01G180000.1	Wheat	cytosol, endoplasmic reticulum, vacuole	8.46	24.51
TraesCS7D01G216100.1	Wheat	cytosol, peroxisome, plasma membrane	9.41	24.21
TraesCS7D01G218200.1	Wheat	plasma membrane, plastid	32.74	21.68
TraesCS7D01G218400.1	Wheat	nucleus, peroxisome, plasma membrane	34.38	21.16
TraesCS6D01G380600.1	Wheat	peroxisome	6.55	21.15
TraesCS7D01G218300.1	Wheat	plasma membrane	31.65	20.68
TraesCS3D01G540400.1	Wheat	cytosol, peroxisome, plasma membrane	6.82	20.33
TraesCS7D01G218100.1	Wheat	plasma membrane	34.52	20.19
TraesCS7D01G219300.1	Wheat	extracellular, plasma membrane, plastid, vacuole	4.64	19.21

Protein Annotations

EnsemblPlants:TraesCS6D01G346300.1	EnsemblPlantsGene:TraesCS6D01G346300	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6D:-:445797205..445799515

Molecular Weight (calculated)

80541.9 Da

IEP (calculated)

8.058

GRAVY (calculated)

0.140

Length

733 amino acids

Sequence
(BLAST)

001: MPNSETNNGT VPAASVIPAA DPESDRKVEE KESRKRLKTE ERLCKVLMLL ATFAVSITYV AGLSTPGGFW DSTGGSHRPG DVILRDHHST RLTVFLLFNT
101: TAFVASLLIA VLLIIDGKKL RDKTARFHVL YVCIFVALVG LIGAYAAGSC RKTDTTAYVV SLVGAVLAYI LLHGFYTWYY SNSALQTDEN QQTGDSGREA
201: LDKARSLVLL LATLAATITY TAGLDPPGGV WQDNGDGHMA GDPILLATNA RRYKAFYYCN SVAFVASLVA IVLVQMEKLV KHHVLEAAMI LDLFGLIGAY
301: AAGSCQNVNT SIYAMALAGA VLIYVVIHVV FFTLDQNNND QEDQLLEKKR KRLLLFAILT VTITYQAGLT PPGGFLLQDD KLGHHAGDPV LLYNYPRRYH
401: AFFYCNSVSF MLSIALIILL VNPNLYRPAI RSNALSVCTA VGLLCLMGAY AAGSTQHIKT SIYIFVLVVV VLLVAAGLLL VFLLRELTGQ GDDGGENKNG
501: ISAAAEPSIP IEQEKEEEKA KKEQEEKAKK KEEEKVKKEE EEEEKAKKEK RKNHARRKYL MLLGILVASI AYQAGLEPPG GAWQSSGNGY EASDPVMHNN
601: MRPRYLVFFY SNSISFVASI VVIIMLLPHW LPDEREEEWK EWSLKVMNRT IRLDLFALLV AYAAGSNRGW KTSVIVVVLI IAVLSYFAIH MILSCTVCQG
701: KKTRGTSASL QHVAMTQQSG NQNPPAQCDS LSV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.