Factsheet for TraesCS6B01G398300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 2
plasma membrane 3
extracellular 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G346300.1	Wheat	plasma membrane	73.44	88.27
TraesCS6A01G363100.2	Wheat	plasma membrane	85.81	80.6
TraesCS6B01G397300.1	Wheat	plasma membrane	70.26	72.74
TraesCS6B01G397000.1	Wheat	plasma membrane	68.22	71.12
TraesCS6B01G398200.1	Wheat	plasma membrane	69.81	69.26
TraesCS6B01G396800.1	Wheat	plasma membrane	69.81	69.18
TraesCS6B01G396700.1	Wheat	plasma membrane	71.4	67.42
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	47.11	67.15
TraesCS6B01G397400.1	Wheat	plasma membrane	62.32	67.03
TraesCS6B01G398100.1	Wheat	plasma membrane	69.69	66.24
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.04	66.22
TraesCS6B01G396900.1	Wheat	plasma membrane	69.35	65.77
TraesCS6B01G397900.1	Wheat	cytosol, plastid	59.82	65.22
TraesCS7B01G048200.1	Wheat	plasma membrane	47.9	59.94
Zm00001d012387_P001	Maize	plasma membrane	34.85	58.14
Zm00001d028649_P001	Maize	plasma membrane	54.6	53.21
TraesCS7B01G124400.1	Wheat	plasma membrane	55.73	52.85
Os06t0296700-01	Rice	plasma membrane	50.74	52.53
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	32.8	47.3
TraesCS7B01G124200.1	Wheat	plasma membrane	47.56	46.3
Os06t0296100-00	Rice	plasma membrane	45.74	45.95
TraesCS3B01G513700.1	Wheat	plasma membrane	39.27	45.71
TraesCS7B01G124300.1	Wheat	plasma membrane	47.11	44.53
TraesCS2B01G139800.1	Wheat	plasma membrane	41.32	43.13
TraesCS6B01G387600.1	Wheat	plasma membrane	41.88	41.32
TraesCS2B01G054300.1	Wheat	plasma membrane	24.97	41.2
TraesCS2B01G054200.1	Wheat	plasma membrane	40.75	41.08
TraesCS2B01G199100.1	Wheat	plastid	6.24	39.57
TraesCS4B01G387200.1	Wheat	plasma membrane	23.61	39.39
TraesCS7B01G029500.1	Wheat	plasma membrane	32.46	39.39
TraesCS6B01G003300.1	Wheat	plasma membrane	39.95	39.2
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	30.42	38.9
TraesCS2B01G065700.1	Wheat	plasma membrane	29.63	38.72
TraesCS5B01G132500.1	Wheat	plasma membrane	38.48	37.38
TraesCS5B01G345200.1	Wheat	plasma membrane	10.22	37.34
TraesCS2B01G508600.1	Wheat	plasma membrane	39.95	34.04
TraesCS3B01G595400.1	Wheat	plasma membrane	32.92	33.72
TraesCS6B01G397700.1	Wheat	plasma membrane	7.83	33.66
TraesCS7B01G124800.1	Wheat	peroxisome	24.29	33.65
TraesCS7B01G124500.1	Wheat	plasma membrane	35.19	31.86
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	8.97	31.35
TraesCS7B01G124700.1	Wheat	plasma membrane	34.73	30.48
TraesCS7B01G124600.1	Wheat	plasma membrane	35.07	30.09
TraesCS2B01G023700.1	Wheat	vacuole	5.45	30.0
TraesCS6B01G435700.1	Wheat	plasma membrane	8.17	29.88
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	5.79	29.82
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	8.4	29.48
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.49	28.09
TraesCS6B01G016300.1	Wheat	plastid	5.11	27.44
TraesCS6B01G435400.1	Wheat	mitochondrion	7.38	26.0
TraesCS7B01G123700.1	Wheat	plasma membrane	33.83	25.82
TraesCS6B01G435100.1	Wheat	plastid	6.81	25.75
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	34.73	25.61
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.81	25.42
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	33.94	24.43
TraesCS7B01G123500.1	Wheat	plasma membrane	34.73	24.13
TraesCS6B01G435300.1	Wheat	plasma membrane	6.36	23.63
TraesCS6B01G436000.1	Wheat	plasma membrane	5.9	21.76
TraesCS7B01G124000.1	Wheat	plasma membrane	20.2	20.82
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	5.45	18.18
TraesCS6B01G436200.1	Wheat	cytosol	6.02	16.21

Protein Annotations

EnsemblPlants:TraesCS6B01G398300.1	EnsemblPlantsGene:TraesCS6B01G398300	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:+:673756500..673759260

Molecular Weight (calculated)

96879.6 Da

IEP (calculated)

8.709

GRAVY (calculated)

0.146

Length

881 amino acids

Sequence
(BLAST)

001: MAQPEQSKQP WEYTLRKYLL LLATLVVNVT YAAGFNPPGG VWQEDPRNDG QRLAGDPIIR DIHYRRYLAF FYCNATAFAA SLVVIMLILI LAVRHDKEKE
101: KGKKDAVQVI KPLRAVMVLD LLSLVVAAVF AYIVVLKLLD RCLPDKNSGS SSNGGMPNSE TNNCAVPGAS AIPAPDPESD RKVKEKESQK KLKTEERLCK
201: VLMLLATFAV SITYVAGLST PGGFWDSTGG SHRPGDVILR DHHSTRLTVF LLFNTTAFVA SLLIAVLLII DGKKLRDKTA RFHVLYVCIF VALVGLIGAY
301: AAGSCRKTDT TAYVVSLVGA VLAYILLHGF YTWYYSNSAL QTDENQQTGD SGREALDKAR SLVLLLATLA AAITYTAVLD PPGGVWQDNG DGHMAGDPIL
401: LATNARRYKA FYYCNSVAFV ASLVAIVLVQ MEKLVKHHVL EAAMILDLFG LIGAYAAGSC RNVNTSIYAM ALAGAVLIYV VIHVVFFTLD HRDQNNNAQE
501: DQLLEKKRKR LLLFAILTVT ITYQAGLTPP GGFLLQDDKL GHHAGDPVLL YNYPRRYHAF FYCNSVSFML SIALIILLVN PNLYRPAIRS NALSVCTAVG
601: LFCLMGAYAA GSTQHIKTSI YIFVLVVVVL LVAAGLLLVF LLRELNKNGN SAAATPSRPT GQEDGEEVNR NDISVAAPRS RLTGQEDREE ENRNGIPAAA
701: APSIPNEQEE EEKAKKEERK NHARRKYLML LGILVASVAY QAGLEPPGGA WQSSGNGYEA GDPVMHNNMR PRYLVFFYSN SISFVASIVV IIMLLPHWLP
801: DEREEEWKTW SLKVMNRTIR LDLFALLVAY AAGSNRGWKT SVVVVALIIA VLGYFAIHMK LSTWSESRHE SQQSSNGNNA V

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.