Factsheet for TraesCS6B01G396800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G398200.1	Wheat	plasma membrane	95.84	95.95
TraesCS6D01G346400.1	Wheat	plasma membrane	93.93	93.93
TraesCS6A01G363200.1	Wheat	plasma membrane	91.79	91.79
TraesCS6B01G397300.1	Wheat	plasma membrane	68.95	72.03
TraesCS6B01G397000.1	Wheat	plasma membrane	68.05	71.6
TraesCS6B01G398100.1	Wheat	plasma membrane	74.35	71.31
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	49.38	71.04
TraesCS6B01G396900.1	Wheat	plasma membrane	74.02	70.83
TraesCS6B01G398300.1	Wheat	plasma membrane	69.18	69.81
TraesCS6B01G397400.1	Wheat	plasma membrane	62.77	68.13
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.57	68.1
TraesCS6B01G396700.1	Wheat	plasma membrane	70.19	66.88
TraesCS6B01G397900.1	Wheat	cytosol, plastid	59.28	65.22
Zm00001d012387_P001	Maize	plasma membrane	34.65	58.33
TraesCS7B01G048200.1	Wheat	plasma membrane	45.78	57.81
TraesCS7B01G124400.1	Wheat	plasma membrane	57.03	54.57
Zm00001d028649_P001	Maize	plasma membrane	55.46	54.54
Os06t0296700-01	Rice	plasma membrane	50.62	52.88
TraesCS3B01G513700.1	Wheat	plasma membrane	40.27	47.29
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	32.17	46.81
TraesCS7B01G124200.1	Wheat	plasma membrane	47.24	46.41
TraesCS2B01G139800.1	Wheat	plasma membrane	43.53	45.85
TraesCS7B01G124300.1	Wheat	plasma membrane	47.81	45.6
Os06t0296100-00	Rice	plasma membrane	44.43	45.04
TraesCS2B01G054300.1	Wheat	plasma membrane	25.53	42.51
TraesCS2B01G054200.1	Wheat	plasma membrane	41.06	41.76
TraesCS6B01G387600.1	Wheat	plasma membrane	41.73	41.55
TraesCS4B01G387200.1	Wheat	plasma membrane	24.07	40.53
TraesCS2B01G065700.1	Wheat	plasma membrane	30.71	40.5
TraesCS2B01G199100.1	Wheat	plastid	6.3	40.29
TraesCS6B01G003300.1	Wheat	plasma membrane	40.16	39.76
TraesCS7B01G029500.1	Wheat	plasma membrane	32.06	39.26
TraesCS5B01G345200.1	Wheat	plasma membrane	10.57	39.0
TraesCS5B01G132500.1	Wheat	plasma membrane	39.15	38.37
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	29.47	38.03
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	10.24	36.11
TraesCS7B01G124800.1	Wheat	peroxisome	25.53	35.69
TraesCS2B01G508600.1	Wheat	plasma membrane	40.83	35.11
TraesCS3B01G595400.1	Wheat	plasma membrane	33.86	35.0
TraesCS7B01G124500.1	Wheat	plasma membrane	36.22	33.09
TraesCS6B01G397700.1	Wheat	plasma membrane	7.42	32.2
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	6.19	32.16
TraesCS7B01G124700.1	Wheat	plasma membrane	35.88	31.77
TraesCS7B01G124600.1	Wheat	plasma membrane	36.22	31.35
TraesCS2B01G023700.1	Wheat	vacuole	5.62	31.25
TraesCS6B01G435700.1	Wheat	plasma membrane	8.21	30.29
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	8.55	30.28
TraesCS6B01G016300.1	Wheat	plastid	5.4	29.27
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.65	28.94
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	36.9	27.45
TraesCS6B01G435100.1	Wheat	plastid	7.09	27.04
TraesCS7B01G123700.1	Wheat	plasma membrane	35.1	27.04
TraesCS6B01G435400.1	Wheat	mitochondrion	7.42	26.4
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	35.32	25.65
TraesCS7B01G123500.1	Wheat	plasma membrane	35.1	24.61
TraesCS6B01G435300.1	Wheat	plasma membrane	6.41	24.05
TraesCS6B01G436000.1	Wheat	plasma membrane	6.41	23.85
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.3	23.73
TraesCS7B01G124000.1	Wheat	plasma membrane	21.15	21.99
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	6.07	20.45
TraesCS6B01G436200.1	Wheat	cytosol	5.85	15.9

Protein Annotations

EnsemblPlants:TraesCS6B01G396800.1	EnsemblPlantsGene:TraesCS6B01G396800	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:-:672618963..672621744

Molecular Weight (calculated)

97765.6 Da

IEP (calculated)

9.364

GRAVY (calculated)

0.248

Length

889 amino acids

Sequence
(BLAST)

001: MECRGVSAVQ VQPAAPMGQP GQPAKPPVQP WEYSLRKYLL LLAALVVTVT YAAGFSPPGG VWQAAHDGQP AGDPIIRGTQ YSRYLAFFYC NATAFAASLV
101: VIVLILILAV RHDKKGKDSR WVVVPLRLVM VLDLLSLMGA YGAGTCQDKV SIVYSAVLVA AVFLYVAVLK MMHWWCPDNK SGSGCDGTMS AAPNRNSNSG
201: GVMSTPNPAS DAGTISSPVR DSDPNVREEE DRKREVLKKL KADERLRKVL MLLATFAVSI TYVAGLSTPG GFWDTTGTSY RPGDAILKDR HRPRLTVFLL
301: CNTTSFVASL LIIMLLIIDS KKLREKKARS LVLYGFIVVA LVSLVGAYTA GSCRETKTTI YVVSLAGGIL AMAYILLYAF YTLTSSRSSP TEQTEAIQQT
401: NDNVSARKGL DKARSLVLLL ATLAATITYT AGLDPPGGVW QDKGDGYIAG DPILITTNIR RYRAFYYCNS VAFVASLVVI VLVQTERLIK HHVLEAAMIL
501: DLFGLIGAYA AGSCRDVNSS IYVMALAGAA LIYVVIHIVF FTLELDHKDK KDDDQEDELL EKRRKRLLLF AILAATITYQ AGLTPPGGFL LQDDTLGHHA
601: GDPILLHNYP VRYYAFFYCN SVSFMLSIAL IILLVNPNLY RPAIRSNALS VCTAVGLFCL MGAYAAGSTQ HRKTSIYIFV LVAVVLLVAA GLLLVFLLKR
701: KRSNAVVAPP REQNEEERKE VEEKNEDEEE AKKHARRKYL MLLGILVASV AYQAGLEPPG GAWQNNDNGY EAGIPVMHDN RRPRYLAFFY SNSISFVASI
801: VVIIMLLPQW LPKKKEGDWE KWSLRVMNWT IRLDLFALLV AYAAGSNRGW KTSVYVVALV FAVLGYFAIH TVLACIVCRR ERRQSTSAV

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.