Factsheet for TraesCS6B01G397800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, endoplasmic reticulum

Predictor Summary:

endoplasmic reticulum 2
plasma membrane 2
extracellular 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G345200.1	Wheat	plasma membrane	23.86	36.93
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	58.98	35.6
TraesCS6B01G397300.1	Wheat	plasma membrane	67.56	29.61
HORVU6Hr1G086570.5	Barley	plasma membrane	65.68	29.27
TraesCS4B01G387200.1	Wheat	plasma membrane	41.02	28.98
TraesCS6B01G398200.1	Wheat	plasma membrane	68.63	28.83
TraesCS6B01G396800.1	Wheat	plasma membrane	68.1	28.57
TraesCS6B01G397000.1	Wheat	plasma membrane	64.61	28.52
TraesCS6B01G398100.1	Wheat	plasma membrane	70.24	28.26
TraesCS6B01G398300.1	Wheat	plasma membrane	66.22	28.04
TraesCS6B01G396900.1	Wheat	plasma membrane	69.44	27.88
TraesCS6B01G396700.1	Wheat	plasma membrane	68.1	27.22
TraesCS7B01G124800.1	Wheat	peroxisome	38.87	22.8
Zm00001d028649_P001	Maize	plasma membrane	54.69	22.57
TraesCS6B01G397400.1	Wheat	plasma membrane	47.72	21.73
TraesCS6B01G397900.1	Wheat	cytosol, plastid	46.92	21.66
Os06t0296700-01	Rice	plasma membrane	49.33	21.62
TraesCS7B01G124400.1	Wheat	plasma membrane	53.35	21.42
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	36.73	19.88
Os06t0296100-00	Rice	plasma membrane	46.65	19.84
TraesCS2B01G065700.1	Wheat	plasma membrane	35.39	19.58
TraesCS7B01G124300.1	Wheat	plasma membrane	48.26	19.31
TraesCS7B01G124200.1	Wheat	plasma membrane	46.11	19.01
TraesCS2B01G139800.1	Wheat	plasma membrane	39.95	17.65
TraesCS6B01G387600.1	Wheat	plasma membrane	41.82	17.47
TraesCS2B01G054200.1	Wheat	plasma membrane	40.48	17.28
TraesCS3B01G595400.1	Wheat	plasma membrane	37.53	16.28
TraesCS7B01G124000.1	Wheat	plasma membrane	37.27	16.26
TraesCS5B01G132500.1	Wheat	plasma membrane	38.87	15.99
TraesCS7B01G048200.1	Wheat	plasma membrane	30.03	15.91
TraesCS6B01G003300.1	Wheat	plasma membrane	37.53	15.59
TraesCS3B01G513700.1	Wheat	plasma membrane	31.64	15.59
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	10.19	15.08
TraesCS7B01G124500.1	Wheat	plasma membrane	38.87	14.9
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	9.38	14.89
TraesCS2B01G508600.1	Wheat	plasma membrane	41.02	14.8
TraesCS6B01G435400.1	Wheat	mitochondrion	9.38	14.0
TraesCS6B01G435700.1	Wheat	plasma membrane	8.85	13.69
TraesCS6B01G436200.1	Wheat	cytosol	11.8	13.46
TraesCS7B01G124600.1	Wheat	plasma membrane	37.0	13.44
TraesCS7B01G124700.1	Wheat	plasma membrane	35.66	13.25
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	8.31	13.14
TraesCS6B01G435300.1	Wheat	plasma membrane	7.77	12.24
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	8.58	12.12
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	8.04	11.95
TraesCS7B01G123700.1	Wheat	plasma membrane	36.46	11.79
TraesCS7B01G029500.1	Wheat	plasma membrane	22.79	11.71
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	35.92	11.21
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	36.19	11.03
TraesCS7B01G123500.1	Wheat	plasma membrane	37.0	10.88
TraesCS6B01G436000.1	Wheat	plasma membrane	6.97	10.88
TraesCS6B01G435100.1	Wheat	plastid	6.43	10.3
TraesCS2B01G199100.1	Wheat	plastid	3.75	10.07
TraesCS2B01G023700.1	Wheat	vacuole	4.29	10.0
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	4.56	9.94
TraesCS6B01G397700.1	Wheat	plasma membrane	4.29	7.8
TraesCS6B01G016300.1	Wheat	plastid	3.22	7.32
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	7.51	4.58
TraesCS2B01G054300.1	Wheat	plasma membrane	4.02	2.81
Zm00001d012387_P001	Maize	plasma membrane	2.95	2.08

Protein Annotations

EnsemblPlants:TraesCS6B01G397800.1	EnsemblPlantsGene:TraesCS6B01G397800	Gene3D:1.20.1250.20	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:-:673365477..673366796

Molecular Weight (calculated)

40675.8 Da

IEP (calculated)

9.118

GRAVY (calculated)

0.359

Length

373 amino acids

Sequence
(BLAST)

001: MDQHGDQPWE YKLRKYLLLL ATVVVTVTYA AGFNPPGGNW QEGARSGRLA GDPITREIHY HRYLAFFYCN ATAFDASLLV IVLILIFAVW HDKEKAITWV
101: ASKVKPLRVV MVLDLLSLVG AYGAGTCRDK ISTVYTAVLA ALVFIYALVL KFKDWWSRCK NSGSGSGAMT VEENKTMKEE GRLRKVLMLL ATFAVSITYV
201: AGLSTSGGFW DSPEGSHRPG DAILKEHHSV RLTVFLLCNT TAFLASLLIT TLLMIAGKKL HDKLARSRVL YACIVVTLVS LIGAYAAGSC RETDTTVYVV
301: SLVGAVVAYI LLQLHGLCSS ESKLLSCFTP DDNGRSRSAR EALDKARSLV LLLATLAATI TYTAGLDPPG GVW

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.