Factsheet for TraesCS6B01G397400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	69.11	95.93
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	67.77	95.03
TraesCS6B01G398100.1	Wheat	plasma membrane	78.39	69.26
TraesCS6B01G396900.1	Wheat	plasma membrane	77.41	68.25
TraesCS6B01G397300.1	Wheat	plasma membrane	68.13	65.57
TraesCS6B01G397900.1	Wheat	cytosol, plastid	62.76	63.61
TraesCS6B01G397000.1	Wheat	plasma membrane	65.2	63.2
TraesCS6B01G396800.1	Wheat	plasma membrane	68.13	62.77
TraesCS6B01G398200.1	Wheat	plasma membrane	68.01	62.73
TraesCS6B01G398300.1	Wheat	plasma membrane	67.03	62.32
TraesCS7B01G048200.1	Wheat	plasma membrane	50.18	58.38
Zm00001d012387_P001	Maize	plasma membrane	37.24	57.77
TraesCS6B01G397100.1	Wheat	endoplasmic reticulum, nucleus, plasma membrane	43.47	57.61
TraesCS6B01G396700.1	Wheat	plasma membrane	65.32	57.34
TraesCS7B01G124400.1	Wheat	plasma membrane	54.46	48.01
TraesCS6B01G397800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	21.73	47.72
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	35.53	47.63
Zm00001d028649_P001	Maize	plasma membrane	51.89	47.01
TraesCS3B01G513700.1	Wheat	plasma membrane	42.98	46.5
Os06t0296700-01	Rice	plasma membrane	47.37	45.59
TraesCS2B01G054300.1	Wheat	plasma membrane	27.84	42.7
TraesCS7B01G124200.1	Wheat	plasma membrane	44.44	40.22
Os06t0296100-00	Rice	plasma membrane	41.76	39.0
TraesCS7B01G124300.1	Wheat	plasma membrane	44.08	38.73
TraesCS7B01G029500.1	Wheat	plasma membrane	33.94	38.29
TraesCS2B01G199100.1	Wheat	plastid	6.47	38.13
TraesCS2B01G139800.1	Wheat	plasma membrane	39.07	37.91
TraesCS2B01G054200.1	Wheat	plasma membrane	39.19	36.73
TraesCS2B01G030400.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	11.11	36.11
TraesCS6B01G387600.1	Wheat	plasma membrane	38.95	35.72
TraesCS2B01G065700.1	Wheat	plasma membrane	27.84	33.83
TraesCS6B01G003300.1	Wheat	plasma membrane	36.63	33.41
TraesCS5B01G132500.1	Wheat	plasma membrane	36.51	32.97
TraesCS2B01G030300.1	Wheat	cytosol, peroxisome, plasma membrane	26.74	31.79
TraesCS6B01G397700.1	Wheat	plasma membrane	7.81	31.22
TraesCS2B01G023700.1	Wheat	vacuole	5.98	30.62
TraesCS4B01G387200.1	Wheat	plasma membrane	19.66	30.49
TraesCS2B01G508600.1	Wheat	plasma membrane	37.73	29.88
TraesCS1B01G041800.1	Wheat	extracellular, plasma membrane, vacuole	6.23	29.82
TraesCS7B01G124800.1	Wheat	peroxisome	23.08	29.72
TraesCS7B01G124500.1	Wheat	plasma membrane	35.16	29.6
TraesCS3B01G595400.1	Wheat	plasma membrane	30.52	29.07
TraesCS6B01G435700.1	Wheat	plasma membrane	8.55	29.05
TraesCS7B01G124700.1	Wheat	plasma membrane	35.29	28.78
TraesCS7B01G124600.1	Wheat	plasma membrane	35.16	28.04
TraesCS6B01G016300.1	Wheat	plastid	5.49	27.44
TraesCS6B01G435200.1	Wheat	cytosol, peroxisome, plasma membrane	7.33	25.53
TraesCS6B01G435300.1	Wheat	plasma membrane	6.96	24.05
TraesCS6B01G435400.1	Wheat	mitochondrion	7.2	23.6
TraesCS6B01G435100.1	Wheat	plastid	6.59	23.18
TraesCS2B01G199200.1	Wheat	cytosol, peroxisome, vacuole	7.08	23.11
TraesCS7B01G123700.1	Wheat	plasma membrane	32.36	22.96
TraesCS7B01G123900.1	Wheat	nucleus, peroxisome, plasma membrane	33.21	22.76
TraesCS6B01G435600.1	Wheat	cytosol, peroxisome, plasma membrane	6.47	22.46
TraesCS7B01G123600.1	Wheat	plasma membrane, plastid	32.6	21.81
TraesCS7B01G123500.1	Wheat	plasma membrane	32.72	21.14
TraesCS5B01G345200.1	Wheat	plasma membrane	5.74	19.5
TraesCS6B01G436000.1	Wheat	plasma membrane	5.62	19.25
TraesCS6B01G436100.1	Wheat	cytosol, peroxisome, plasma membrane	5.62	17.42
TraesCS7B01G124000.1	Wheat	plasma membrane	16.97	16.26
TraesCS6B01G436200.1	Wheat	cytosol	4.76	11.93

Protein Annotations

EnsemblPlants:TraesCS6B01G397400.1	EnsemblPlantsGene:TraesCS6B01G397400	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6B:+:672893346..672896077

Molecular Weight (calculated)

89460.3 Da

IEP (calculated)

8.394

GRAVY (calculated)

0.277

Length

819 amino acids

Sequence
(BLAST)

001: MVLDLLSLMG AYGAGTCRDK ISIFYFAVLV AIVFLYILVL KLMDCWDKNS DSSAGMIPAP VASSIDGMPV NMGSDSGGTT PIPNPDSGTS SGPVASCDGR
101: MPVSNDNTGS DDIMPAPNPD SSTDTIPAPI LGSDPAIVDK RFRDRKALKK LKAEERLRKV LMLLATFAVS ITYVAGLSTP GGFWDSTGGS HRPGDAILKD
201: QHNPRLTVFL LCNTTAFVVS LLITMLLIID GKKLRKKKTA RSRMLCGCIV VALVGLVGAY IAGSCREIDT TAYVASLVGA VLAIAHIILL YGIYASAQQT
301: EEIQQTDANV STIQCSGKEV LDKARSLVLL LATLAAAITY TAGLKPPGGL WQDNTNGHMA GDPILLTTNA SRYKAFFYCN SVAFVASLVA IVLVQTEILV
401: KHHVLEAAMI LDLFGLIGAY AAGSCRGVNS SIYVMALAGL VLVYVVIHVI FFTLDHEDKN HDNQANQLLE KRRKRLLLFA ILAATITYQA GLTPPGGFLL
501: QDDNLGHQAG DPVLLYNFPR RYKAFFYCNS VSFMLSISLI LLLVNPNLYR PAIRSNALSV CTAVGLFCLM VAYAAGSTQH LKTSIYIFVL VGVVLFVAAG
601: LLLVFALREQ NNSDNSAAAA SSISHEQEEE EERNKEEERK KHARRKYLML LGILVASVAY QAGLEPPGGA WQSSGNGYEA GDPVMHDIRR PRYLVFFYSN
701: SFSFVASIVV IMMLLPHWLP NRKKEEWEKW SLRVMNWTIL LDLVALLVAY AAGSSRGWKT SVYVSMLILA VLGYFAIHMT LSIWSDRCHR RRPLHERVES
801: SQENPRVWIN LLPNWSMPA

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.