Factsheet for TraesCS6A01G363500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, mitochondrion

Predictor Summary:

plastid 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G346900.1	Wheat	mitochondrion, plasma membrane	96.44	97.43
TraesCS6B01G397400.1	Wheat	plasma membrane	95.93	69.11
TraesCS7A01G217500.1	Wheat	plasma membrane	27.46	59.78
TraesCS7A01G217400.1	Wheat	plasma membrane	60.51	59.7
Zm00001d012387_P001	Maize	plasma membrane	51.53	57.58
TraesCS6A01G363300.1	Wheat	plasma membrane	71.69	49.82
TraesCS6A01G363200.1	Wheat	plasma membrane	72.54	48.14
Os06t0295300-00	Rice	golgi, mitochondrion, nucleus, plasma membrane	49.49	47.79
TraesCS6A01G363400.1	Wheat	peroxisome	70.34	46.52
TraesCS6A01G363100.2	Wheat	plasma membrane	72.37	45.52
TraesCS5A01G042100.1	Wheat	plasma membrane	69.49	45.3
TraesCS7A01G217300.1	Wheat	peroxisome	60.17	41.42
Os06t0296700-01	Rice	plasma membrane	55.42	38.43
Zm00001d028649_P001	Maize	plasma membrane	58.81	38.38
TraesCS7A01G216500.1	Wheat	plasma membrane	30.51	33.64
TraesCS3A01G471000.1	Wheat	plasma membrane	48.98	33.03
TraesCS4A01G450000.1	Wheat	plasma membrane	41.86	32.46
Os06t0296100-00	Rice	plasma membrane	47.97	32.27
TraesCS2A01G041700.1	Wheat	plasma membrane	44.58	29.78
TraesCS7A01G040300.1	Wheat	plasma membrane	47.12	29.26
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	8.47	28.57
TraesCS5A01G551500.1	Wheat	plasma membrane	44.75	28.0
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	46.44	27.85
TraesCS2A01G041800.1	Wheat	plasma membrane	43.56	27.49
TraesCS6A01G354600.1	Wheat	plasma membrane	43.39	27.29
TraesCS4A01G449800.1	Wheat	peroxisome	45.76	27.19
TraesCS7A01G038400.1	Wheat	plasma membrane	47.12	27.18
TraesCS7A01G038500.1	Wheat	plasma membrane	46.61	26.99
TraesCS4A01G449900.1	Wheat	plasma membrane	46.61	26.96
TraesCS5A01G132400.1	Wheat	plasma membrane	41.36	26.93
TraesCS7A01G129400.1	Wheat	plasma membrane	42.2	26.92
TraesCS4A01G450200.1	Wheat	plasma membrane	46.61	26.86
TraesCS5A01G358400.1	Wheat	plasma membrane	38.14	26.13
TraesCS7A01G095400.1	Wheat	plasma membrane	42.88	25.69
TraesCS4A01G448200.1	Wheat	plasma membrane	38.98	25.08
TraesCS5A01G551400.1	Wheat	plasma membrane	42.2	25.03
TraesCS5A01G551600.1	Wheat	plasma membrane	43.05	24.73
TraesCS7A01G217600.1	Wheat	plasma membrane	38.98	23.71
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	39.83	23.59
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	9.66	23.55
TraesCS7A01G217700.1	Wheat	plasma membrane	37.8	23.47
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	11.02	22.73
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	9.15	22.69
TraesCS6A01G354800.1	Wheat	plasma membrane	45.08	21.61
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	8.47	21.28
TraesCS6A01G395500.1	Wheat	cytosol	4.92	19.33
TraesCS7A01G216700.1	Wheat	plasma membrane	36.61	18.78
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	7.8	18.62
TraesCS7A01G217100.1	Wheat	plasma membrane	36.1	18.28
TraesCS4A01G395800.1	Wheat	plasma membrane	15.08	17.84
TraesCS7A01G216300.1	Wheat	plasma membrane	36.1	16.63
TraesCS7A01G216900.1	Wheat	plasma membrane	15.93	10.94
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.1	10.08
TraesCS7A01G216600.1	Wheat	cytosol, plastid	5.08	4.43

Protein Annotations

EnsemblPlants:TraesCS6A01G363500.1	EnsemblPlantsGene:TraesCS6A01G363500	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF51
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6A:+:592549355..592551340

Molecular Weight (calculated)

65541.5 Da

IEP (calculated)

9.150

GRAVY (calculated)

0.289

Length

590 amino acids

Sequence
(BLAST)

001: MLLIIDGKKL RKKKTTRSRM LCGCIVVALV GLVGAYIAGS CREIDTTAYV ASLVGAVLAI AHIILLYGIY TSTQQTEEIQ QTDDNVSTIQ CSGKEVLDKA
101: RSLVLLLATL AAAITYTAGL KPPGGLWQDN TNGHMAGDPI LLTTNASRYK AFFYCNSVAF VASLVAIVLV QMEILVKHHV LEAAMILDLF GLIGAYAAGS
201: CRDANNSIYV IALAGLVLVY VVIHVIFFTL DHEDKHHGDQ VNQLLEKRRK RLLLFAILAA TITYQAGLTP PGGFLLQDDK LGHQAGDPVL LYNFPRRYKA
301: FFYCNSVSFM LSISLILLLV NPNLYRPAIR SNALSVCTAV GLFCLMVAYA AGSTQHLKTS IYIFVLVGAV LFVAAGLLLV FALREQNNSD NSAAAAPSIS
401: HEQEEEEEER KKEEERKKHA RRKYLMLLGI LVASVAYQAG LEPPGGAWQS SGNGYEAGDP VMHDIRRPRY LVFFYSNSFS FVASIVVIMM LLPHWLPNRK
501: KEEWEKWSLR VMNWTILLDL VTLLVAYAAG SSRGWKTSVY VSMLILAVLG YFAIHMTLSI WSDRCRRRRL RERLQSSQEN PRVWINLLPN

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.