Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G436200.1 | Wheat | cytosol | 68.07 | 74.31 |
| TraesCS6A01G395500.1 | Wheat | cytosol | 24.93 | 59.33 |
| TraesCS6A01G395200.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.53 | 46.38 |
| TraesCS6A01G395900.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.01 | 41.32 |
| TraesCS6A01G395800.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.45 | 39.68 |
| Os04t0168400-01 | Rice | endoplasmic reticulum, golgi, plasma membrane | 10.92 | 21.2 |
| TraesCS2A01G000300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 8.12 | 16.57 |
| TraesCS2A01G173000.1 | Wheat | cytosol, plasma membrane, vacuole | 9.8 | 14.71 |
| TraesCS7A01G214000.1 | Wheat | cytosol, peroxisome, plasma membrane | 11.2 | 13.99 |
| TraesCS4A01G395800.1 | Wheat | plasma membrane | 15.41 | 11.02 |
| TraesCS3A01G471000.1 | Wheat | plasma membrane | 19.33 | 7.89 |
| TraesCS6A01G363300.1 | Wheat | plasma membrane | 17.65 | 7.42 |
| TraesCS7A01G217300.1 | Wheat | peroxisome | 17.09 | 7.12 |
| TraesCS5A01G132400.1 | Wheat | plasma membrane | 17.93 | 7.06 |
| TraesCS2A01G041700.1 | Wheat | plasma membrane | 17.37 | 7.02 |
| TraesCS7A01G038500.1 | Wheat | plasma membrane | 19.89 | 6.97 |
| TraesCS6A01G363400.1 | Wheat | peroxisome | 17.37 | 6.95 |
| TraesCS7A01G217700.1 | Wheat | plasma membrane | 18.49 | 6.95 |
| TraesCS7A01G040300.1 | Wheat | plasma membrane | 18.49 | 6.95 |
| TraesCS4A01G450100.2 | Wheat | mitochondrion, plasma membrane | 19.05 | 6.91 |
| TraesCS5A01G551500.1 | Wheat | plasma membrane | 17.93 | 6.79 |
| TraesCS6A01G363100.2 | Wheat | plasma membrane | 17.65 | 6.72 |
| TraesCS7A01G217600.1 | Wheat | plasma membrane | 18.21 | 6.7 |
| TraesCS4A01G449800.1 | Wheat | peroxisome | 18.21 | 6.55 |
| TraesCS7A01G217800.1 | Wheat | nucleus, peroxisome, plasma membrane | 18.21 | 6.53 |
| TraesCS6A01G363200.1 | Wheat | plasma membrane | 16.25 | 6.52 |
| TraesCS7A01G129400.1 | Wheat | plasma membrane | 16.81 | 6.49 |
| TraesCS7A01G038400.1 | Wheat | plasma membrane | 18.49 | 6.45 |
| TraesCS4A01G450200.1 | Wheat | plasma membrane | 18.49 | 6.45 |
| TraesCS7A01G216900.1 | Wheat | plasma membrane | 15.41 | 6.4 |
| TraesCS6A01G354600.1 | Wheat | plasma membrane | 16.81 | 6.4 |
| TraesCS5A01G358400.1 | Wheat | plasma membrane | 15.41 | 6.39 |
| TraesCS4A01G449900.1 | Wheat | plasma membrane | 18.21 | 6.37 |
| TraesCS2A01G041800.1 | Wheat | plasma membrane | 16.53 | 6.31 |
| TraesCS5A01G042100.1 | Wheat | plasma membrane | 15.97 | 6.3 |
| TraesCS6A01G363500.1 | Wheat | mitochondrion, plasma membrane | 10.08 | 6.1 |
| TraesCS5A01G551600.1 | Wheat | plasma membrane | 17.37 | 6.04 |
| TraesCS7A01G217400.1 | Wheat | plasma membrane | 10.08 | 6.02 |
| TraesCS5A01G551400.1 | Wheat | plasma membrane | 16.53 | 5.93 |
| TraesCS7A01G095400.1 | Wheat | plasma membrane | 16.25 | 5.89 |
| TraesCS4A01G450000.1 | Wheat | plasma membrane | 12.32 | 5.78 |
| TraesCS4A01G448200.1 | Wheat | plasma membrane | 14.29 | 5.56 |
| TraesCS6A01G354800.1 | Wheat | plasma membrane | 16.81 | 4.87 |
| TraesCS7A01G216700.1 | Wheat | plasma membrane | 15.69 | 4.87 |
| TraesCS7A01G217100.1 | Wheat | plasma membrane | 15.41 | 4.72 |
| TraesCS7A01G216300.1 | Wheat | plasma membrane | 16.81 | 4.68 |
| TraesCS7A01G216500.1 | Wheat | plasma membrane | 6.72 | 4.49 |
| TraesCS7A01G216600.1 | Wheat | cytosol, plastid | 7.28 | 3.84 |
| TraesCS7A01G217500.1 | Wheat | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G396200.1 | EnsemblPlantsGene:TraesCS6A01G396200 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF15 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:608505176..608508548
Molecular Weight (calculated)
38173.0 Da
IEP (calculated)
4.304
GRAVY (calculated)
-0.171
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEQAHSVAI AIEEDMLLGD SSLLEEAERG AMPSGEGVLL GDSSQSQLQE ISVNHESMLE EADIVAISIG EEVLHGDSSL PKEADSRAIS IGEEVLHGDS
101: SLPKEADSRA IPSGEGILLG DSLQSQQQEI NANHENTAEE ADTVATPLGL RRRLGGSSLL EEADRVAISI GEKVLLGDSS LPEEANRMAI PSGEGLQLVH
201: SPQPQQQEIT IDHSPHMSID ELLKVIKGAN GMPVLFVPSS NGRLAAVAVD GLQSLVPANR SNEESAEKKH EAFCSWLMLL MSLVATVTFT AGLTPPGGFW
301: AADDKSNGHV AGMSVMRSKS YRRYLNFYYS NTTAFFTSLM IIGMLARNIN NLQSPLT
101: SLPKEADSRA IPSGEGILLG DSLQSQQQEI NANHENTAEE ADTVATPLGL RRRLGGSSLL EEADRVAISI GEKVLLGDSS LPEEANRMAI PSGEGLQLVH
201: SPQPQQQEIT IDHSPHMSID ELLKVIKGAN GMPVLFVPSS NGRLAAVAVD GLQSLVPANR SNEESAEKKH EAFCSWLMLL MSLVATVTFT AGLTPPGGFW
301: AADDKSNGHV AGMSVMRSKS YRRYLNFYYS NTTAFFTSLM IIGMLARNIN NLQSPLT
001: MDAFETHLPK EIVSDPLYNS FNPRSEEYVV AGKILRQRSV FDLDKNGFSP LHAAAAAGQV ETVRATLGVE KKLCRLKDRD GKTPLHVATM RGKIDVIREI
101: VASCVDCLED ETVQGQTALH LAVLHLEIEA VIAIVELITE TNRFDVLNKK DEQGNTALHL ATWRKNRQVI EVLVQAIPEE SRSFEVNAMN KMGLSAMDLL
201: VMFPSEAGDR EIYEKLIEAG AQRGRDIGTT NVERTTSTST CQERTMKSQS HKELVKYFTF KKHRDSPSEA RSALLVVASL VATATFQASL TPPGGTWQDS
301: SIPAVSQNTT NVNTTNQQAH TAGQSIMGTF NGVAFTLFVF FNTIGFSVSL SMLNILTLGF PLRFQLQICM IAMYFSHNTT MASIAPDHVK LYCILITSIL
401: AATTPGLMRL LENPIGMLAH FLDSRSQKIC SMISLSCKRF VT
101: VASCVDCLED ETVQGQTALH LAVLHLEIEA VIAIVELITE TNRFDVLNKK DEQGNTALHL ATWRKNRQVI EVLVQAIPEE SRSFEVNAMN KMGLSAMDLL
201: VMFPSEAGDR EIYEKLIEAG AQRGRDIGTT NVERTTSTST CQERTMKSQS HKELVKYFTF KKHRDSPSEA RSALLVVASL VATATFQASL TPPGGTWQDS
301: SIPAVSQNTT NVNTTNQQAH TAGQSIMGTF NGVAFTLFVF FNTIGFSVSL SMLNILTLGF PLRFQLQICM IAMYFSHNTT MASIAPDHVK LYCILITSIL
401: AATTPGLMRL LENPIGMLAH FLDSRSQKIC SMISLSCKRF VT
Arabidopsis Description
Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LU58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.