Factsheet for TraesCS4A01G450200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G450000.1	Wheat	plasma membrane	63.77	85.81
TraesCS7A01G038400.1	Wheat	plasma membrane	80.76	80.84
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	63.96	66.56
TraesCS7A01G040300.1	Wheat	plasma membrane	59.38	64.0
TraesCS4A01G449800.1	Wheat	peroxisome	61.33	63.24
TraesCS4A01G449900.1	Wheat	plasma membrane	59.67	59.9
TraesCS7A01G038500.1	Wheat	plasma membrane	59.18	59.47
TraesCS4A01G448200.1	Wheat	plasma membrane	51.37	57.36
TraesCS2A01G041700.1	Wheat	plasma membrane	47.95	55.61
TraesCS3A01G471000.1	Wheat	plasma membrane	46.09	53.94
TraesCS2A01G041800.1	Wheat	plasma membrane	46.97	51.44
Zm00001d045859_P001	Maize	plastid	29.39	51.1
KXG35244	Sorghum	plasma membrane	36.13	50.14
Zm00001d045793_P001	Maize	plasma membrane	40.53	48.65
TraesCS6A01G363300.1	Wheat	plasma membrane	38.67	46.64
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	26.86	46.61
TraesCS7A01G217400.1	Wheat	plasma membrane	27.05	46.32
TraesCS7A01G217500.1	Wheat	plasma membrane	11.62	43.91
TraesCS7A01G217300.1	Wheat	peroxisome	36.52	43.64
TraesCS6A01G363400.1	Wheat	peroxisome	37.6	43.16
TraesCS6A01G363200.1	Wheat	plasma membrane	36.82	42.41
TraesCS6A01G363100.2	Wheat	plasma membrane	38.18	41.68
TraesCS5A01G042100.1	Wheat	plasma membrane	36.33	41.1
TraesCS5A01G551500.1	Wheat	plasma membrane	34.57	37.54
TraesCS7A01G129400.1	Wheat	plasma membrane	33.11	36.65
TraesCS6A01G354600.1	Wheat	plasma membrane	32.81	35.82
TraesCS5A01G358400.1	Wheat	plasma membrane	29.49	35.08
TraesCS5A01G551400.1	Wheat	plasma membrane	34.08	35.08
TraesCS7A01G095400.1	Wheat	plasma membrane	33.69	35.03
TraesCS4A01G395800.1	Wheat	plasma membrane	16.8	34.47
TraesCS5A01G132400.1	Wheat	plasma membrane	30.37	34.33
TraesCS5A01G551600.1	Wheat	plasma membrane	33.89	33.79
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	5.66	33.14
TraesCS7A01G216500.1	Wheat	plasma membrane	17.19	32.9
TraesCS6A01G354800.1	Wheat	plasma membrane	38.57	32.09
TraesCS7A01G217600.1	Wheat	plasma membrane	29.88	31.55
TraesCS7A01G217700.1	Wheat	plasma membrane	29.2	31.47
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	30.57	31.43
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	7.23	31.09
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	8.3	29.72
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	6.64	28.1
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	6.35	27.66
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	6.54	27.13
TraesCS6A01G395500.1	Wheat	cytosol	3.91	26.67
TraesCS7A01G216700.1	Wheat	plasma membrane	29.59	26.35
TraesCS7A01G217100.1	Wheat	plasma membrane	28.81	25.32
TraesCS7A01G216300.1	Wheat	plasma membrane	29.1	23.26
TraesCS7A01G216900.1	Wheat	plasma membrane	17.58	20.95
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.45	18.49
TraesCS7A01G216600.1	Wheat	cytosol, plastid	11.23	16.99

Protein Annotations

EnsemblPlants:TraesCS4A01G450200.1	EnsemblPlantsGene:TraesCS4A01G450200	InterPro:PGG_dom	PANTHER:PTHR24177	PANTHER:PTHR24177:SF45	PFAM:PF13962
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4A:+:715816135..715819591

Molecular Weight (calculated)

112098.0 Da

IEP (calculated)

8.668

GRAVY (calculated)

0.086

Length

1024 amino acids

Sequence
(BLAST)

0001: MAIEQIEKPQ PQQKQGQGDE DDDSKLYEFK EQLLLLSTLV ATVTYVAGLN LPGGSWEQDD PEGHMAGDPI LLATHYRRYL AFYYCNATAL AASLVVSLIL
0101: VILPKNSTPW TVVLQMVMVL DLLGLMGAYG AGSCRDAFTT IYAVAAFSFS VLVIISVFLS LLAKANRDRA VGSDTIPITI SGDDKDVNLG SNSITTNGDG
0201: NKVQSSKPRR NFMKRAREIY AGVVIRKEGK NRGEKEMVDV LMLLATFAVT ITYVAGLSPP GGFWTSTQDG HRLSDPVLQA RNRYRVFFIC NTTSFTVSLL
0301: IIVLLLEKKL LGWKKLRLVA LCGLIVVVLL GLMGAYAAGS CREAGKTILV LTVPVSVCLL LALVFIWGSL ADRLDSVITW FRELVNIKIP SGTCRGTNVV
0401: LHEQNTRDLV MLLATLVVTI TYQAGLDPPG GLWPDDRDGH NIGHPVLQTT HPTRYRVFFY SNSAAFVTSL VVIMMLQSKF LLNRHTLEAT LVLDLFGLIT
0501: AYGAGSTREV TQSIYIVALA GIVLVYVIVH ITIRDHDPEP VGDDAVKHLD DKRKVLLLVA VLAATLTYQA GLTPPGGFWL ADDRELGRRA GFPILLDNYT
0601: RRYNTFFYCN AASFMASVTL ILLLVNPKLY RPGIRCRALY VCMLVGMFGL MGAYAAGSSR NLKTSVYVLT LVGAVLAFIA SLLAIFWLLP YLKSQEGRVF
0701: CFDPFGKSQK GTDGQVVAGH SCRKSHEGTE GQVEAGHSSS KFHEGTDEQL EAGHSSRKSH EGTDGQVEAG HSSSKSHEGT DEQLEAGHSS SKSHEGTDGR
0801: IEAGHSSGNK ISSKKEKLQY LMLLGILAAS MTYQTGLKPP GGLWQDNNDG HYAGNPILHD INKDRYNAFF YSNSASFMAS IVAVVMLLPL TLFPEKYTTK
0901: SFKKDTKSPG EDTKSLDKIM KPAEKDPKLT EKDKESPKKD TWPLWPMHMA ILLDMMGLLV AYAAGSTRKW ETSRNVMVLI VPVLAYIGLY AALSVFCHRE
1001: KKTKVATAPQ VRLNCRCVGG TAGV

Best Arabidopsis Sequence Match ( AT4G11000.1 )
(BLAST)

001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP

Arabidopsis Description

Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.