Factsheet for TraesCS6A01G354600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G551500.1	Wheat	plasma membrane	66.1	65.75
TraesCS7A01G129400.1	Wheat	plasma membrane	61.94	62.81
Os06t0293000-00	Rice	vacuole	19.08	62.59
TraesCS7A01G095400.1	Wheat	plasma membrane	64.39	61.32
TraesCS4A01G395800.1	Wheat	plasma membrane	32.52	61.12
TraesCS5A01G551600.1	Wheat	plasma membrane	66.42	60.66
TraesCS5A01G551400.1	Wheat	plasma membrane	62.9	59.3
Os06t0293100-00	Rice	cytosol	30.6	58.45
TraesCS5A01G358400.1	Wheat	plasma membrane	46.7	50.87
TraesCS6A01G363500.1	Wheat	mitochondrion, plasma membrane	27.29	43.39
TraesCS6A01G363300.1	Wheat	plasma membrane	39.23	43.35
TraesCS7A01G217400.1	Wheat	plasma membrane	27.51	43.14
TraesCS3A01G471000.1	Wheat	plasma membrane	39.13	41.94
TraesCS5A01G132400.1	Wheat	plasma membrane	40.51	41.94
TraesCS7A01G217500.1	Wheat	plasma membrane	11.83	40.96
TraesCS6A01G363400.1	Wheat	peroxisome	38.7	40.7
TraesCS7A01G217300.1	Wheat	peroxisome	36.78	40.26
TraesCS6A01G363200.1	Wheat	plasma membrane	37.42	39.48
TraesCS7A01G217700.1	Wheat	plasma membrane	39.66	39.16
TraesCS5A01G042100.1	Wheat	plasma membrane	37.63	39.01
TraesCS7A01G217600.1	Wheat	plasma membrane	40.3	38.97
TraesCS6A01G363100.2	Wheat	plasma membrane	38.91	38.91
TraesCS2A01G041700.1	Wheat	plasma membrane	35.5	37.71
TraesCS7A01G217800.1	Wheat	nucleus, peroxisome, plasma membrane	39.87	37.55
TraesCS2A01G041800.1	Wheat	plasma membrane	35.5	35.62
TraesCS7A01G040300.1	Wheat	plasma membrane	35.71	35.26
TraesCS7A01G216500.1	Wheat	plasma membrane	20.04	35.14
TraesCS4A01G450100.2	Wheat	mitochondrion, plasma membrane	35.93	34.25
TraesCS2A01G000300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	6.29	33.71
TraesCS4A01G449800.1	Wheat	peroxisome	35.29	33.33
TraesCS7A01G038500.1	Wheat	plasma membrane	35.93	33.07
TraesCS4A01G450200.1	Wheat	plasma membrane	35.82	32.81
TraesCS4A01G450000.1	Wheat	plasma membrane	26.44	32.59
TraesCS7A01G038400.1	Wheat	plasma membrane	35.5	32.55
TraesCS4A01G449900.1	Wheat	plasma membrane	35.07	32.25
TraesCS4A01G448200.1	Wheat	plasma membrane	31.24	31.95
TraesCS2A01G173000.1	Wheat	cytosol, plasma membrane, vacuole	8.0	31.51
TraesCS6A01G395500.1	Wheat	cytosol	5.01	31.33
TraesCS6A01G395900.1	Wheat	cytosol, peroxisome, plasma membrane	7.89	30.58
TraesCS6A01G395800.1	Wheat	cytosol, peroxisome, plasma membrane	7.78	29.55
TraesCS7A01G216700.1	Wheat	plasma membrane	35.71	29.13
TraesCS7A01G217100.1	Wheat	plasma membrane	35.71	28.76
TraesCS7A01G214000.1	Wheat	cytosol, peroxisome, plasma membrane	8.42	27.62
TraesCS6A01G354800.1	Wheat	plasma membrane	35.93	27.38
TraesCS6A01G395200.1	Wheat	cytosol, peroxisome, plasma membrane	6.72	26.81
TraesCS7A01G216300.1	Wheat	plasma membrane	36.25	26.54
TraesCS7A01G216900.1	Wheat	plasma membrane	21.43	23.4
TraesCS7A01G216600.1	Wheat	cytosol, plastid	14.39	19.94
TraesCS6A01G396200.1	Wheat	cytosol, nucleus, plastid	6.4	16.81

Protein Annotations

EnsemblPlants:TraesCS6A01G354600.1	EnsemblPlantsGene:TraesCS6A01G354600	InterPro:PGG_dom	ncoils:Coil	PANTHER:PTHR24177	PANTHER:PTHR24177:SF15
PFAM:PF13962	SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr6A:+:585971048..585974096

Molecular Weight (calculated)

101166.0 Da

IEP (calculated)

9.360

GRAVY (calculated)

0.372

Length

938 amino acids

Sequence
(BLAST)

001: MATEAEEDIK FLWKWRKYLL LLATLVAGVT YVAGLNPPGG VRSEEADPDP PAPAPVVYPH RVGDPVLAAT YSARYSAFFY CNAAAFVASL VVIMFLLDRR
101: ISGSRVGLTV LRSAMLLDLL ALMASFAAGS CRDVVASVYV SALFALVFAY VAIHVCVSSS SPRRLLLRKL ADSGVSPSSV SSSSPRGVLL QKLADSGVVS
201: PGSEEERLKL KERRKFLLLL ATFATPLTYG AGLAPPGGFW SKSVDGHIAG APLLHDGRYK IRYHAFFYAN ATSFVASLAI IMLLMSRTLS HLLARSYALP
301: VCVLVELLGL MAAYAAGSCR RVDTTVYIVS LAGAVLLNIL LQAAVALLAM DTFHFQRWRK VICDVLTCAS CLDRKRKRMP GSAATNATAT VPATPPQGVE
401: SKNGALAAEE EKSEEEEERE ESRSLLLLLA TLAATVTYQA GLSPPGGVWQ EGQPHRTPGD PILLDISPMR YKAFYHCNTA ALAASLVVIV IVQSKELSSG
501: AALKGTALKT AMILNLFGLM GAYAAGSCRD ASTTIYVSAL AVAVFVYSIA KVVAYTLTGR SSWLMDRVHD MSDTLAGWLQ LSGDNQPKLD LEKKRKFLLQ
601: LAILAATVTY QTGLNPPGGF WPESKEERKL IAGDPILLDY YWSRYQVFFY CNATGFMASV AVILLLVNQT LYKQVIRSNA LHVCIVVGLL GLIGAYAAGS
701: CRKLRTSIYV FALVALVVAF LILQILLFVS ADRFHWSELQ CLPTWLRRLF EPLSSSPAGS DGENNKSKQH QKSSEDYMKR KYLMLLGILA ASVTYQAGLA
801: PPGGTWGDDA PAPTRTATGN PVLLDTHGAR YQAFFYCNAT SFMASVVVTM LLLQRTVKRR GAPLWAMQAA VVLDLLGLLG AYAAGSCRNL ETSAYVIAVV
901: AGVVVFVTLH VLLSFDAVVT RAKELRVVRY LGSGGSGS

Best Arabidopsis Sequence Match ( AT5G50140.1 )
(BLAST)

001: MALPMFGSID FTNWFLKKLE EQDESFGGTF LHLAVKLGNE ELVKKIVEIH PSLVSSTNTK SDTPLHLAAR LGHTSILLLM LESTAESIES LEETVPNDLK
101: LAEMVNKDGF TPLHCAVMNG SVETLTAFIN KAPLSFDSVT LQTSETVFHL AARHKKMEAF IFMAKNANLR RLLYELDGEG NTVLHAAASV GFLSLVSYIV
201: HEIKIEVTTQ NDKGFEAVDL LNKDDEDFKM MSMILGHDSE IVQRAASSPR DAYTPSTQTE VENSEIHHEQ GLVAPEIKEE NVTNENNKVF EAIDLPTKED
301: GDLKMLAGTD SETFQLPSSR TGILTPETET EMVISNTLHG IRHGLRESRI KEKEMQSEAL QNARNTITVV AVLIASVTFT CGLNPPGGVY QDGHFIGKAT
401: AGGTVAFKVF SVSNSIALFT SLCIVILLLS IIPFRTKSLK TFLIITHKMI WLAVIAMASA YVAGTCVTLP HSRGNKWVLK ATLVIACVML GGMFIFLWFK
501: LANHMSRKKK MRKNMMSRIE TLNKAAAFVD GYYSY

Arabidopsis Description

Ankyrin repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9FG97]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.