Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0293000-00 | Rice | vacuole | 30.26 | 52.8 |
| TraesCS7A01G095400.1 | Wheat | plasma membrane | 72.34 | 36.65 |
| TraesCS3B01G595400.1 | Wheat | plasma membrane | 59.52 | 34.53 |
| TraesCS6A01G354600.1 | Wheat | plasma membrane | 61.12 | 32.52 |
| TraesCS5A01G551500.1 | Wheat | plasma membrane | 60.92 | 32.24 |
| TraesCS7A01G129400.1 | Wheat | plasma membrane | 57.92 | 31.24 |
| TraesCS5A01G551600.1 | Wheat | plasma membrane | 59.72 | 29.02 |
| TraesCS5A01G551400.1 | Wheat | plasma membrane | 57.31 | 28.74 |
| TraesCS2A01G173000.1 | Wheat | cytosol, plasma membrane, vacuole | 13.03 | 27.31 |
| TraesCS5A01G358400.1 | Wheat | plasma membrane | 45.89 | 26.6 |
| TraesCS6A01G395500.1 | Wheat | cytosol | 7.21 | 24.0 |
| TraesCS2A01G000300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 8.42 | 24.0 |
| TraesCS7A01G214000.1 | Wheat | cytosol, peroxisome, plasma membrane | 12.83 | 22.38 |
| TraesCS6A01G395800.1 | Wheat | cytosol, peroxisome, plasma membrane | 11.02 | 22.27 |
| TraesCS6A01G363300.1 | Wheat | plasma membrane | 37.68 | 22.14 |
| TraesCS6A01G395900.1 | Wheat | cytosol, peroxisome, plasma membrane | 10.62 | 21.9 |
| TraesCS5A01G132400.1 | Wheat | plasma membrane | 39.48 | 21.74 |
| TraesCS7A01G217300.1 | Wheat | peroxisome | 36.87 | 21.47 |
| TraesCS6A01G395200.1 | Wheat | cytosol, peroxisome, plasma membrane | 9.82 | 20.85 |
| TraesCS3A01G471000.1 | Wheat | plasma membrane | 36.47 | 20.8 |
| TraesCS6A01G363400.1 | Wheat | peroxisome | 37.07 | 20.74 |
| TraesCS6A01G363200.1 | Wheat | plasma membrane | 36.87 | 20.7 |
| TraesCS6A01G363100.2 | Wheat | plasma membrane | 38.68 | 20.58 |
| TraesCS5A01G042100.1 | Wheat | plasma membrane | 37.27 | 20.55 |
| TraesCS7A01G216900.1 | Wheat | plasma membrane | 34.67 | 20.14 |
| TraesCS7A01G217700.1 | Wheat | plasma membrane | 38.28 | 20.11 |
| TraesCS7A01G217600.1 | Wheat | plasma membrane | 38.68 | 19.9 |
| TraesCS2A01G041700.1 | Wheat | plasma membrane | 34.07 | 19.25 |
| TraesCS7A01G217800.1 | Wheat | nucleus, peroxisome, plasma membrane | 37.68 | 18.88 |
| TraesCS7A01G040300.1 | Wheat | plasma membrane | 33.87 | 17.79 |
| TraesCS2A01G041800.1 | Wheat | plasma membrane | 32.87 | 17.54 |
| TraesCS4A01G450100.2 | Wheat | mitochondrion, plasma membrane | 33.87 | 17.17 |
| TraesCS7A01G216600.1 | Wheat | cytosol, plastid | 23.05 | 16.99 |
| TraesCS4A01G449800.1 | Wheat | peroxisome | 33.67 | 16.92 |
| TraesCS4A01G450200.1 | Wheat | plasma membrane | 34.47 | 16.8 |
| TraesCS7A01G038500.1 | Wheat | plasma membrane | 34.27 | 16.78 |
| TraesCS4A01G449900.1 | Wheat | plasma membrane | 33.67 | 16.47 |
| TraesCS7A01G038400.1 | Wheat | plasma membrane | 32.87 | 16.03 |
| TraesCS7A01G217400.1 | Wheat | plasma membrane | 18.84 | 15.72 |
| TraesCS6A01G396200.1 | Wheat | cytosol, nucleus, plastid | 11.02 | 15.41 |
| TraesCS6A01G363500.1 | Wheat | mitochondrion, plasma membrane | 17.84 | 15.08 |
| TraesCS7A01G216700.1 | Wheat | plasma membrane | 33.87 | 14.7 |
| TraesCS4A01G448200.1 | Wheat | plasma membrane | 26.85 | 14.61 |
| TraesCS7A01G217100.1 | Wheat | plasma membrane | 33.47 | 14.33 |
| TraesCS7A01G216300.1 | Wheat | plasma membrane | 36.67 | 14.29 |
| TraesCS6A01G354800.1 | Wheat | plasma membrane | 33.67 | 13.65 |
| TraesCS4A01G450000.1 | Wheat | plasma membrane | 19.24 | 12.62 |
| Os06t0293100-00 | Rice | cytosol | 11.22 | 11.41 |
| TraesCS7A01G216500.1 | Wheat | plasma membrane | 9.62 | 8.97 |
| TraesCS7A01G217500.1 | Wheat | plasma membrane | 0.4 | 0.74 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G395800.1 | EnsemblPlantsGene:TraesCS4A01G395800 | InterPro:PGG_dom | PANTHER:PTHR24177 | PANTHER:PTHR24177:SF15 | PFAM:PF13962 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:670942190..670943807
Molecular Weight (calculated)
53977.9 Da
IEP (calculated)
9.318
GRAVY (calculated)
0.316
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTAPPPAGN STTEQRTEYF KFLWKWRKYL LLLAMLVASV TYAAGLNPPG GVRSDEEPAL SAARQKRIGD PVLLATSPRR YAAFFYCNAA AFVTSLVVIM
101: FLLDRRISGN RVGLAVLSSA MLLDLLALVA AFIAGSCRNV VASIYVSALF ALVFAILCVY KDRRKAAVRT SVDKFLMLLS TFATPLTYGA GLSPPGGFWS
201: QTEAGHRAGA PLLHDGPYKI RYNVFFYANA NSFVASLAII MLVMSRTASG SIIRSYLLSV CLLVELLGLP AAFAAGSSTR VDTTMYVVCL AAAALLMIVL
301: QVAAMFLRTR MLMCNTSPGQ PDANGIRANG QEEDGDEEDV IRVERTNNIE NGQVGHMVES RSILLLLATL AATVTYQAGL SPPGGVWPHN NDQGHPDHIP
401: GNPILLDIHP KRYKAFYYCN TAAFVASLVV IVIVQSNELS SGTTIRRVTL KTAIILGLYG LMGAQVAGSS PDAPTTIQWR SQLSGKAWQL PHLNLNQMY
101: FLLDRRISGN RVGLAVLSSA MLLDLLALVA AFIAGSCRNV VASIYVSALF ALVFAILCVY KDRRKAAVRT SVDKFLMLLS TFATPLTYGA GLSPPGGFWS
201: QTEAGHRAGA PLLHDGPYKI RYNVFFYANA NSFVASLAII MLVMSRTASG SIIRSYLLSV CLLVELLGLP AAFAAGSSTR VDTTMYVVCL AAAALLMIVL
301: QVAAMFLRTR MLMCNTSPGQ PDANGIRANG QEEDGDEEDV IRVERTNNIE NGQVGHMVES RSILLLLATL AATVTYQAGL SPPGGVWPHN NDQGHPDHIP
401: GNPILLDIHP KRYKAFYYCN TAAFVASLVV IVIVQSNELS SGTTIRRVTL KTAIILGLYG LMGAQVAGSS PDAPTTIQWR SQLSGKAWQL PHLNLNQMY
001: MKLLRKTVKV KAKNLDGKTA MDILQTHQSP CFPVAKKLLR SAKERPFCGS TTTLAGYLSR NLSFIEKRNS LLGLSNLSMT KDRSINASDP RNAILVVAIL
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
101: IVTATYQAGL SPPGGFWQDT NDGRYGHMAG QMTMPFIYAF FFIGLNGFAF VSSLYVIIII TIGLPKWKLL YGSVAALSIA ALASYSTIFP SSYDANSYLS
201: VLTFLCAYIS IICIMMFATF MAFIVDKHRR YQVDFPASCF SSSQEP
Arabidopsis Description
Ankyrin repeat family protein [Source:TAIR;Acc:AT4G11000]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.